BO28090.complete Sequence
443 bp assembled on 2011-06-17
> BO28090.complete
GAAGTTATCAGTCGACATGTTGGACCAACTTACACTGTGTTTGTTGCTAA
ATTTTCTGTGCGCAAATGTTCTCGCTAACACTTCAGTATTTAATCCGTGT
GTTTCGCAAAATGAGTTATCCGAATATGAAGCCCACCAAGTGATGGAGAA
TTGGCCAGTTCCGCCCATCGATCGGGCTTACAAATGCTTTCTAACATGCG
TCCTCTTGGATTTGGGTCTGATTGATGAACGGGGTAATGTGCAGATCGAT
AAGTACATGAAATCCGGAGTGGTGGACTGGCAATGGGTGGCAATAGAGTT
GGTAACATGTCGCATAGAATTCAGCGACGAAAGGGATCTGTGCGAGCTAT
CATATGGAATCTTCAACTGCTTCAAGGATGTGAAGCTTGCGGCCGAGAAG
TATGTTTCAATTAGTAATGCAAAGGCCAAGCTTTCTAGACCAT
BO28090.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:51:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57e-RA | 411 | CG30145-PA | 1..408 | 17..424 | 2040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:51:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57e-RA | 411 | CG30145-RA | 1..408 | 17..424 | 2040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:51:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20547819..20548169 | 424..74 | 1755 | 100 | Minus |
2R | 25286936 | 2R | 20548234..20548291 | 74..17 | 290 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:51:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
baggins | 5453 | baggins BAGGINS 5453bp | 3939..3981 | 289..331 | 107 | 72.1 | Plus |
BO28090.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:43 Download gff for
BO28090.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57e-RA | 6..411 | 22..425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:17 Download gff for
BO28090.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57e-RA | 6..411 | 22..425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:40 Download gff for
BO28090.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57e-RA | 6..411 | 22..425 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:40 Download gff for
BO28090.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20547816..20548169 | 74..427 | 99 | <- | Minus |
2R | 20548235..20548286 | 22..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:17 Download gff for
BO28090.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16435321..16435674 | 74..427 | 99 | <- | Minus |
arm_2R | 16435740..16435791 | 22..73 | 100 | | Minus |
BO28090.pep Sequence
Translation from 16 to 442
> BO28090.pep
MLDQLTLCLLLNFLCANVLANTSVFNPCVSQNELSEYEAHQVMENWPVPP
IDRAYKCFLTCVLLDLGLIDERGNVQIDKYMKSGVVDWQWVAIELVTCRI
EFSDERDLCELSYGIFNCFKDVKLAAEKYVSISNAKAKLSRP
BO28090.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:29:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57e-PA | 136 | CG30145-PA | 1..136 | 1..136 | 725 | 100 | Plus |
Obp57d-PB | 136 | CG30150-PB | 31..129 | 26..120 | 172 | 32.3 | Plus |