BO28101.complete Sequence
325 bp assembled on 2011-06-21
GenBank Submission: KX799803
> BO28101.complete
GAAGTTATCAGTCGACATGAAGGTTCAGCTCGCTCTAACCTCCCTACTAG
TGATTTCTTTTGGCATTGCCCTCGCCTATGATGGTGACGGACAGCCGGGT
TGCAAGACCCAAGCCGAGCTAGACATTGTAGTTTTCCGCAACAATTGGGA
TGCCACATCGTATTGGAAGTGTGAGACACTTAACAAACCAGCCATTGAAA
TCAAGTGCCCCAGCGAAACAGGATTCATGGATAGTCTCAAGAACTGCGTC
AACTGGGAGGAATGGGAATGGGAGAAACCAGTGGAGCCCCTTAGCGAAGC
GGATCAGGCAAGCTTTCTAGACCAT
BO28101.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:16:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14645-RA | 294 | CG14645-PA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:16:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14645-RA | 409 | CG14645-RA | 20..310 | 17..307 | 1455 | 100 | Plus |
Skp2-RA | 2412 | CG9772-RA | 1884..2174 | 307..17 | 1455 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:16:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4335117..4335407 | 17..307 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:16:49 has no hits.
BO28101.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 11:09:41 Download gff for
BO28101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14645-RA | 1..291 | 17..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:47 Download gff for
BO28101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Skp2-RA | 1892..2186 | 17..309 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:11 Download gff for
BO28101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Skp2-RA | 1880..2174 | 17..309 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:11 Download gff for
BO28101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4335117..4335407 | 17..309 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:47 Download gff for
BO28101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 160839..161129 | 17..309 | 99 | | Plus |
BO28101.pep Sequence
Translation from 16 to 325
> BO28101.pep
MKVQLALTSLLVISFGIALAYDGDGQPGCKTQAELDIVVFRNNWDATSYW
KCETLNKPAIEIKCPSETGFMDSLKNCVNWEEWEWEKPVEPLSEADQASF
LDH
BO28101.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14645-PA | 97 | CG14645-PA | 1..97 | 1..97 | 531 | 100 | Plus |
CG14245-PB | 103 | CG14245-PB | 29..103 | 25..99 | 175 | 38.7 | Plus |
CG14245-PA | 103 | CG14245-PA | 29..103 | 25..99 | 175 | 38.7 | Plus |
Peritrophin-15a-PA | 92 | CG17814-PA | 16..88 | 12..85 | 161 | 39.2 | Plus |
CG14300-PA | 94 | CG14300-PA | 1..90 | 1..91 | 161 | 34.1 | Plus |