BO28102.complete Sequence
496 bp assembled on 2011-06-17
GenBank Submission: KX796661
> BO28102.complete
GAAGTTATCAGTCGACATGAAACTGTTAATATGGTTGTGCCTCCTCGGCT
TCCTGGCCAGTGCCTATGGCATTTTCCTGGACAAGATTACCGGTCGAGGG
GATTCATCTGGAAACGGCCTACTAGACGATATCTTTGGACTCGAAGACTC
GGATAACAGCAGCCACAACAAAACCTCCCAACATGCATTGCCAGCGTCGG
GAATTTTTACTCCGGTTAAAGTAGCTGTTGACGTTATTCAAAATATATGG
GATGAATTTTCTAAGGGAGTTTTAGGCCTTATGGGCAGTTTTGGTACCGG
TGATGATGGAGGCGAATCACCGCCGTCTGGGAATACAGCGCCTGTCACAA
CAGAGTCTAGTTTGCCATCGCAAGAAACCACAACGACTAGAACAACGCCG
TTTACAACAACGGAATCCAGAACGGAATCGGTCTTGGAAACAACCACAAC
AGATTCATCCACGAGTACTTTGCCGCCAGCAAGCTTTCTAGACCAT
BO28102.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:52:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5402-RA | 465 | CG5402-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5402-RA | 615 | CG5402-RA | 28..490 | 16..478 | 2315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27502679..27502929 | 266..16 | 1255 | 100 | Minus |
3R | 32079331 | 3R | 27502215..27502429 | 478..264 | 1075 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:52:11 has no hits.
BO28102.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:44 Download gff for
BO28102.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 29..490 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:26 Download gff for
BO28102.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 29..490 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:48 Download gff for
BO28102.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 29..490 | 17..480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:48 Download gff for
BO28102.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27502213..27502427 | 266..480 | 99 | <- | Minus |
3R | 27502680..27502928 | 17..265 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:26 Download gff for
BO28102.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23327935..23328149 | 266..480 | 99 | <- | Minus |
arm_3R | 23328402..23328650 | 17..265 | 100 | | Minus |
BO28102.pep Sequence
Translation from 16 to 496
> BO28102.pep
MKLLIWLCLLGFLASAYGIFLDKITGRGDSSGNGLLDDIFGLEDSDNSSH
NKTSQHALPASGIFTPVKVAVDVIQNIWDEFSKGVLGLMGSFGTGDDGGE
SPPSGNTAPVTTESSLPSQETTTTRTTPFTTTESRTESVLETTTTDSSTS
TLPPASFLDH
BO28102.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:29:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5402-PA | 154 | CG5402-PA | 1..154 | 1..154 | 795 | 100 | Plus |