BO28104.complete Sequence
364 bp assembled on 2011-06-17
GenBank Submission: KX797001
> BO28104.complete
GAAGTTATCAGTCGACATGGGCGGACATCACGGCGAACCCTACACGGTGC
CCCACGCATCGACCTACAAGGTGGAGAGTGTGCCCCAACTCGTGGAGGTG
AAGGAGGCTCTGGGCCGCCAGGGATTGAAGGATCCATGGCTGAGGAACGA
AGTCTGGCGCTATGAGCCCAAGGCCTTCGGCACCCACAGATCCCGCCTGA
ACACCTTCCTTTTCCGCGGACTCGGCGTGGGATTCTGCGCTTTCCTGGCC
ACCGTCGCCGTGGAGTACGCGCTGGGCATTGGCAAGGGTCAGGGCGGCCA
TGGACATGGCCACGGTCACGAGGAACACGGAGATAAGGGCCACCATGCAA
GCTTTCTAGACCAT
BO28104.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:52:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10320-RE | 333 | CG10320-PE | 1..330 | 17..346 | 1650 | 100 | Plus |
CG10320-RD | 333 | CG10320-PD | 1..330 | 17..346 | 1650 | 100 | Plus |
CG10320-RC | 333 | CG10320-PC | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:52:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10320-RE | 405 | CG10320-RE | 40..369 | 17..346 | 1650 | 100 | Plus |
CG10320-RD | 525 | CG10320-RD | 160..489 | 17..346 | 1650 | 100 | Plus |
CG10320-RC | 520 | CG10320-RC | 155..484 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21658538..21658741 | 143..346 | 1020 | 100 | Plus |
2R | 25286936 | 2R | 21658353..21658481 | 17..145 | 645 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 14:52:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader3 | 5484 | invader3 INVADER3 5484bp | 354..395 | 80..121 | 102 | 71.4 | Plus |
BO28104.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:45 Download gff for
BO28104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10320-RE | 43..372 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:37 Download gff for
BO28104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10320-RC | 155..484 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:56 Download gff for
BO28104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10320-RC | 155..484 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:56 Download gff for
BO28104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21658353..21658480 | 17..144 | 100 | -> | Plus |
2R | 21658540..21658741 | 145..348 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:37 Download gff for
BO28104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17545858..17545985 | 17..144 | 100 | -> | Plus |
arm_2R | 17546045..17546246 | 145..348 | 99 | | Plus |
BO28104.pep Sequence
Translation from 16 to 364
> BO28104.pep
MGGHHGEPYTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLRNEVWRYE
PKAFGTHRSRLNTFLFRGLGVGFCAFLATVAVEYALGIGKGQGGHGHGHG
HEEHGDKGHHASFLDH
BO28104.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:29:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10320-PE | 110 | CG10320-PE | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PD | 110 | CG10320-PD | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PC | 110 | CG10320-PC | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PB | 110 | CG10320-PB | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PA | 110 | CG10320-PA | 1..110 | 1..110 | 616 | 100 | Plus |