BO28109.complete Sequence
325 bp assembled on 2011-09-14
GenBank Submission: KX798161
> BO28109.complete
GAAGTTATCAGTCGACATGGTTTGGATTTCGAGCTGGGGGCAACTTTGGC
TGGTGTTGCTATTGGTTGTGGGCCTATCGTTGGGTCTTCCGAGCTTGGAA
AACCAGACACACGAACAAATCGAACAGATAATAGCCTGCAGACAGCCAAA
GGCACCTGGTTTGTGCCGGGGTCACCAGTTGCGATATGCCTACAACAAGA
AGACCGGAAACTGCGAGAGCTTCATCTACACGGGCTGTGCCTCCACTGAG
AACAATTTCCTGACCTTCGAGGAGTGTCGCAGGGATTGCATGCAACGTCT
GCGCTACGCAAGCTTTCTAGACCAT
BO28109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:11:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15418-RA | 294 | CG15418-PA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:11:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15418-RA | 508 | CG15418-RA | 176..466 | 17..307 | 1455 | 100 | Plus |
Dot-RB | 2303 | CG2788-RB | 1882..2056 | 307..133 | 875 | 100 | Minus |
Dot-RB | 2303 | CG2788-RB | 2119..2236 | 134..17 | 590 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3621152..3621326 | 307..133 | 875 | 100 | Minus |
2L | 23513712 | 2L | 3621389..3621506 | 134..17 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:11:56 has no hits.
BO28109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 11:59:06 Download gff for
BO28109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15418-RA | 176..466 | 17..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:27 Download gff for
BO28109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15418-RA | 176..466 | 17..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:32 Download gff for
BO28109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15418-RA | 176..466 | 17..309 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:32 Download gff for
BO28109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3621149..3621324 | 135..309 | 98 | <- | Minus |
2L | 3621389..3621506 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:27 Download gff for
BO28109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3621149..3621324 | 135..309 | 98 | <- | Minus |
arm_2L | 3621389..3621506 | 17..134 | 100 | | Minus |
BO28109.pep Sequence
Translation from 16 to 325
> BO28109.pep
MVWISSWGQLWLVLLLVVGLSLGLPSLENQTHEQIEQIIACRQPKAPGLC
RGHQLRYAYNKKTGNCESFIYTGCASTENNFLTFEECRRDCMQRLRYASF
LDH
BO28109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15418-PA | 97 | CG15418-PA | 1..97 | 1..97 | 531 | 100 | Plus |
CG3604-PB | 132 | CG3604-PB | 55..113 | 41..99 | 145 | 44.1 | Plus |
CG3604-PA | 132 | CG3604-PA | 55..113 | 41..99 | 145 | 44.1 | Plus |
CG2816-PB | 84 | CG2816-PB | 9..81 | 16..91 | 134 | 38.2 | Plus |