BO28117.complete Sequence
550 bp assembled on 2011-06-17
GenBank Submission: KX798006
> BO28117.complete
GAAGTTATCAGTCGACATGATGAAGTTCATGTGCATCTGCCTCTGCGCCA
TCTCTGCCGTTTCGGCCAACTCCTACGGACGTTCCCGTGGTGGATACGGT
GGTGCCCCAGTCGGTGGCTATGCCTACCAGGTGCAGCCTGCCCTGACCGT
TAAGGCGATCGTTCCCTCATACGGTGGTGGATACGGCGGAAACCATGGAG
GATATGGCGGTGCCTACGAGTCGGTGCCTGTGCCCGTGTCCTCTGCCTAC
AGCGGTGCCAATGTGGGATCTCAGTACTCCGGTTCCGGCTACGGCGGTGC
CCCACCAGTTGATGCCCAGGCCATTGCCCTCGCCAAGCTCGCCCTGGCCG
CTCCCAGCGCTGGAGCTCCTCTGGTCTGGAAGGAGGCTCCCCGCTACGCC
CAGCCCGTCTATCCCCCCACCAGCTACGTGAACCAGGAGTACGGACACAG
CGAGAAGGTGAAGGGAGGCTCCGCAGCCGCTGCTGCCAGCTCCGTGGCCG
CCGGAAAGAAGGGCTACAAGAGGCCCAGCTACGCAAGCTTTCTAGACCAT
BO28117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp18-RA | 519 | CG6517-PA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:53:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp18-RA | 649 | CG6517-RA | 45..560 | 17..532 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:53:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8727023..8727524 | 31..532 | 2510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:53:57 has no hits.
BO28117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:49 Download gff for
BO28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp18-RA | 45..560 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:06 Download gff for
BO28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp18-RA | 45..560 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:24 Download gff for
BO28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp18-RA | 45..560 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:24 Download gff for
BO28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8727024..8727524 | 32..534 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:06 Download gff for
BO28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8720124..8720624 | 32..534 | 99 | | Plus |
BO28117.pep Sequence
Translation from 16 to 550
> BO28117.pep
MMKFMCICLCAISAVSANSYGRSRGGYGGAPVGGYAYQVQPALTVKAIVP
SYGGGYGGNHGGYGGAYESVPVPVSSAYSGANVGSQYSGSGYGGAPPVDA
QAIALAKLALAAPSAGAPLVWKEAPRYAQPVYPPTSYVNQEYGHSEKVKG
GSAAAAASSVAAGKKGYKRPSYASFLDH
BO28117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp18-PA | 172 | CG6517-PA | 1..172 | 1..172 | 907 | 100 | Plus |
CG14191-PA | 193 | CG14191-PA | 55..155 | 21..116 | 139 | 35.6 | Plus |