BO28118.complete Sequence
982 bp assembled on 2011-06-17
GenBank Submission: KX797573
> BO28118.complete
GAAGTTATCAGTCGACATGAGAGTGCGACTGACTTTGCTAACGATATGCA
TTTACCTATGCGCGGCTGCAGCTGAGGATCTGGACTCCATCCATGAGATC
CGCAGTGAGGTGGAGGAGCTGATCAAAGGTACGGAGGAGCTAAACCATGG
GCTGCAGAAAGTGAAGGACGTGCAGAAGGGCATTGAAGAGAAGTTCAAGC
ATCAGCGCGACGAGATCGAACTCATTGCTGGATTGGAGGTTGCCATAGCC
AAGCTGGAATCGAACGTTCAAAGCAGCTTCCAAGCCACGGCCTCTGGAGT
GGGAAATTTGACAGCCATTGTTAACGCAATCCAGGGTCAGAATGAAAACT
CTATTAGGAATCTTACCAAAGTGGAGCTAGAAATCAGGAAAGCCCTGGAA
CAAGTGGCTGCCAATCAGAACAAATACGAGCAGAACCTAAATGAAGTGGC
CTCATCCGTCAACTCGCATCTGTCGGAGATTCAGCAGCTGCTATCACAGG
CCGTCATAGGGGAACTCATCGGCTTGGACAATAAAGCGAAGGTCCTCCAG
GAGCAGCAGCGCAACATCGTGGGTCAAGTGGGATATCTGGGCGAACTTAA
GGCTCTGGCAGATCGTGCCAATCGCAAAGTCAATCAATTGGAGTGGGGTC
TGGTCATTCTCAACCGCACTCAGTCCGAGAGCCTCAACAGCATCGAGCAC
ACTGTCCATGGAGTGCAGGTGGCCACCTCACAGGTCGATCATAAACTGGC
TGCCCTACTGAACAATCAGAAGAACATTGAAAGGACGCTGGATGGCTGCA
AGCACAAAAATCCGTCACACCAGAAGCCCCACGAGATCTGGACTCACCCG
GAACACGCACCAATTTACAAGCCAAAACCAGAGGGCAATCAAGGATACGA
GAACGTCTATGCATCCCAAGAAGAGGCTGAATACCTATACAAACTTTGGT
ATGGAAAGGGCCAGGCAAGCTTTCTAGACCAT
BO28118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-RB | 951 | CG13083-PB | 1..948 | 17..964 | 4740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-RB | 1145 | CG13083-RB | 34..982 | 16..964 | 4745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19487523..19488378 | 16..871 | 4280 | 100 | Plus |
| 2L | 23513712 | 2L | 19488435..19488528 | 871..964 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:54:01 has no hits.
BO28118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:50 Download gff for
BO28118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 35..982 | 17..966 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:08 Download gff for
BO28118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 35..982 | 17..966 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:25 Download gff for
BO28118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 35..982 | 17..966 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:25 Download gff for
BO28118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19487524..19488377 | 17..870 | 100 | -> | Plus |
| 2L | 19488435..19488528 | 871..966 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:08 Download gff for
BO28118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19487524..19488377 | 17..870 | 100 | -> | Plus |
| arm_2L | 19488435..19488528 | 871..966 | 97 | | Plus |
BO28118.pep Sequence
Translation from 16 to 982
> BO28118.pep
MRVRLTLLTICIYLCAAAAEDLDSIHEIRSEVEELIKGTEELNHGLQKVK
DVQKGIEEKFKHQRDEIELIAGLEVAIAKLESNVQSSFQATASGVGNLTA
IVNAIQGQNENSIRNLTKVELEIRKALEQVAANQNKYEQNLNEVASSVNS
HLSEIQQLLSQAVIGELIGLDNKAKVLQEQQRNIVGQVGYLGELKALADR
ANRKVNQLEWGLVILNRTQSESLNSIEHTVHGVQVATSQVDHKLAALLNN
QKNIERTLDGCKHKNPSHQKPHEIWTHPEHAPIYKPKPEGNQGYENVYAS
QEEAEYLYKLWYGKGQASFLDH
BO28118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-PB | 316 | CG13083-PB | 1..316 | 1..316 | 1605 | 100 | Plus |
| CG13084-PA | 454 | CG13084-PA | 1..308 | 1..306 | 212 | 22.7 | Plus |
