BO28119.complete Sequence
1288 bp assembled on 2011-06-17
GenBank Submission: KX800059
> BO28119.complete
GAAGTTATCAGTCGACATGCAGTCTTCGCCGAAACTCGCACTGGCACTGA
CCTTAGTGCTGATTTGGTGCCTGGCCCAAAGTCATGTGGAATCCAGAAGA
TGGCGAAAGTCCGTGCAACTGAAACTGCACAGGGAAACGAACCACACCAA
AATACTGAGCAGTTTCCACAACCAGAAGCTTAGACTCAAGGAAAAACTGA
GCCCGACCAGCGATTTGGCGATATCCTCGGTATCTGTATATCAAACAACC
GTGTCAAAAGAGAACCTGATCAATTCCCACAACACCGAGTACTATGTTAC
GGCCGGTTTCGGGACGCCCAAGTCGCAGCCAGTCACTCTTCTGGTGGACA
CCGCCTCGGCGAATCTGCTGGTCTACTCCTCGGAGTTTGTGAAACAGTCC
TGTTTGCACCACGATGGCTACAATTCCAGTGAGTCGCAAACGTATCAGGC
CAATGGATCGCCCTTTCAGATACAGTTCGCATCGCAGGAAATTCTGACAG
GAATCCTCTCCACGGACACTTTCACCTTAGGAGATCTGGTCATTAAGAAT
CAGACCTTTGCCGAAATAAACTCGGCGCCTACGGATATGTGTAAACGATC
GAATTTCGATGGCATCATTGGTCTGGGATTCTCCGAAATCGCCCTGAATG
GAGTGGAGACCCCTCTGGACAATATTTTGGAACAGGGACTCATCGACGAA
CCCATCTTCTCCCTGTACGTCAACCGGAACGCCTCGGATGCCAGTAATGG
TGGCGTATTGCTGCTCGGAGGATCAGATCCCACTCTTTACAGCGGATGCC
TGACATACGTGCCAGTTTCCAAAGTGGGTTTTTGGCAGATCACCGTGGGC
CAAGTTGAGATTGGGTCCAAGAAGCTGTGCTCCAACTGCCAGGCCATCTT
CGATATGGGAACCTCCTTGATAATTGTGCCGTGCCCTGCTCTGAAAATCA
TAAACAAGAAACTGGGCATTAAGGAAACCGATAGAAAGGACGGTGTCTAT
ATCATTGACTGCAAGAAGGTGTCTCATTTGCCCAAGATCGTCTTTAATAT
TGGATGGAAGGACTTCACCCTCAACCCGTCCGACTATATTCTCAACTACA
GTGGAACCTGCGTATCAGGGTTTTCTAGTCTCTCCGACTGCAATGGAACG
CAAACCAATGATGATAGTGAAGACTTGAACAACATCTGGGTGTTCGGCGA
TGTGTTTTTCGGAGCAATCTTCACATTGTTCGATTTTGGTCTCAAATTAG
TTGGCATGGCCCCCAAAGTTGCAAGCTTTCTAGACCAT
BO28119.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31928-RB | 1257 | CG31928-PB | 1..1254 | 17..1270 | 6270 | 100 | Plus |
| CG31928-RA | 1257 | CG31928-PA | 1..1254 | 17..1270 | 6270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31928-RB | 1565 | CG31928-RB | 20..1273 | 17..1270 | 6270 | 100 | Plus |
| CG31928-RA | 1351 | CG31928-RA | 20..1273 | 17..1270 | 6270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1492314..1493567 | 17..1270 | 6270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:54:06 has no hits.
BO28119.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:50 Download gff for
BO28119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31928-RA | 20..1273 | 17..1272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:09 Download gff for
BO28119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31928-RA | 20..1273 | 17..1272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:26 Download gff for
BO28119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31928-RA | 20..1273 | 17..1272 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:26 Download gff for
BO28119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1492314..1493567 | 17..1272 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:09 Download gff for
BO28119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1492314..1493567 | 17..1272 | 99 | | Plus |
BO28119.pep Sequence
Translation from 16 to 1288
> BO28119.pep
MQSSPKLALALTLVLIWCLAQSHVESRRWRKSVQLKLHRETNHTKILSSF
HNQKLRLKEKLSPTSDLAISSVSVYQTTVSKENLINSHNTEYYVTAGFGT
PKSQPVTLLVDTASANLLVYSSEFVKQSCLHHDGYNSSESQTYQANGSPF
QIQFASQEILTGILSTDTFTLGDLVIKNQTFAEINSAPTDMCKRSNFDGI
IGLGFSEIALNGVETPLDNILEQGLIDEPIFSLYVNRNASDASNGGVLLL
GGSDPTLYSGCLTYVPVSKVGFWQITVGQVEIGSKKLCSNCQAIFDMGTS
LIIVPCPALKIINKKLGIKETDRKDGVYIIDCKKVSHLPKIVFNIGWKDF
TLNPSDYILNYSGTCVSGFSSLSDCNGTQTNDDSEDLNNIWVFGDVFFGA
IFTLFDFGLKLVGMAPKVASFLDH
BO28119.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31928-PB | 418 | CG31928-PB | 1..418 | 1..418 | 2169 | 100 | Plus |
| CG31928-PA | 418 | CG31928-PA | 1..418 | 1..418 | 2169 | 100 | Plus |
| CG31926-PB | 410 | CG31926-PB | 28..409 | 30..418 | 765 | 41.5 | Plus |
| CG31926-PA | 410 | CG31926-PA | 28..409 | 30..418 | 765 | 41.5 | Plus |
| Bace-PB | 372 | CG13095-PB | 55..370 | 78..416 | 657 | 41.9 | Plus |
