Clone BO28122 Report

Search the DGRC for BO28122

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:281
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG13114-RB
Protein status:BO28122.pep: Imported from assembly
Sequenced Size:1312

Clone Sequence Records

BO28122.complete Sequence

1312 bp assembled on 2011-09-14

GenBank Submission: KX796312

> BO28122.complete
GAAGTTATCAGTCGACATGTTCGAACGCTGCAATTTATTATTTATGACCA
TGCTGATGGCATCGGCACTATTGACCCAAGCCCATTTCCCGGAATATTGT
GCGGAATGTGAACAGGAGGTGTGGGAACAGGTGCCGTGCAGCGAGGTGCC
CACAACGGTAGCGCCAACAACAACCGGAGGCTCTACGTTGAGCCCGCCCA
CAACCAGCGCCACCAGCCCGGGACCTATTTACCCAACAACAACCAGTGCC
CCACCCACGCCCACGGATTACACTACACAGCCATCGGAGTACAAGAAGTG
CTACTGCGAATGCAAGCTGGGCTGCAAGGAGTTCTGCCGCAAGGTGATCT
CTTCTGAGCCCAAGCAGCCGCTCACCCAGATCTCATCCATTGGGGAGTAT
GCCCCAGGTGGCCAGGTGGAGTACACGCATGTCCATCAGCGCAAATACTT
TCCCAAGTACGGAGGCGAATCCTATGGGGGATTGGTAGGACCAGTGGGCG
GACCCAAGGCCTATAAGCCATATCCATTGGTCTACGAACAGGCGGCATCA
GCTGCTTCACCGGCTTCCATTCCCTCGGTGGCTTCCTCACCAGCGGTGGC
CAGCATAGCTGCTCCTAATTACACGCTGGAGGAGTTGGCCCAATTGCTTA
GCACTGCGTATGGCACCAAGAAGGGCTACCCAGCTAGTGTGCCAACTCCG
CCACGTATTCAGCTTCAGCCAGCTCCCTCCGTTTTCTATTCCCCGGTTCC
AAGCTACAAAAAGCAAGTGGTTCCACTCGTGAGCAAAGTGGCGCCGGCAC
CCAAAATCTCCTCCAGCATTAAGTATGCCGCCTCAGCGGTTTCATCATCA
TCATCGGGCGTGTCGGTGGCCAAGATAAAGACTCCCTACGAGGAGAAGAT
TGTGGTGGCCACACCGTCTCCCATTTATGAGAGATCCACATCGTATCCTA
TTGTTGAAGCACCCAAGGAATACTCGGCGCCCCAGACGGAAGTCTATCCC
GTTGTGCAGAGCCAAACGGAGTCGTATCCCAGCCACACACCCATATATCC
AAGTCCCACGGAATCCTATCCCAGCCAAAAGGACTCCTACCCCAGCATCA
CAGAGTCATATCCCAGCCAAACTGAGTCCTATCAACCGCGTACGGAAGCC
TATCCCGTACCCCAACCGGAGATCAAGCCATATGGTGGTCCCGATTCTGG
ACCCGATAAGCCATCGTCCACGTTCGATCTGGCCATCGATAATTATCTGA
AGGACTTCGGATATGGCAACCAAGGAAGGGGATATGCGGACTACGCAAGC
TTTCTAGACCAT

BO28122.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-RB 1281 CG13114-PB 1..1278 17..1294 6390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-RB 1530 CG13114-RB 123..1400 17..1294 6390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9546017..9547294 17..1294 6390 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:12:14 has no hits.

BO28122.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 11:59:07 Download gff for BO28122.complete
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 128..1400 22..1296 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:37 Download gff for BO28122.complete
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 128..1400 22..1296 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:41 Download gff for BO28122.complete
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 128..1400 22..1296 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:41 Download gff for BO28122.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9546022..9547294 22..1296 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:37 Download gff for BO28122.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9546022..9547294 22..1296 99   Plus

BO28122.pep Sequence

Translation from 16 to 1312

> BO28122.pep
MFERCNLLFMTMLMASALLTQAHFPEYCAECEQEVWEQVPCSEVPTTVAP
TTTGGSTLSPPTTSATSPGPIYPTTTSAPPTPTDYTTQPSEYKKCYCECK
LGCKEFCRKVISSEPKQPLTQISSIGEYAPGGQVEYTHVHQRKYFPKYGG
ESYGGLVGPVGGPKAYKPYPLVYEQAASAASPASIPSVASSPAVASIAAP
NYTLEELAQLLSTAYGTKKGYPASVPTPPRIQLQPAPSVFYSPVPSYKKQ
VVPLVSKVAPAPKISSSIKYAASAVSSSSSGVSVAKIKTPYEEKIVVATP
SPIYERSTSYPIVEAPKEYSAPQTEVYPVVQSQTESYPSHTPIYPSPTES
YPSQKDSYPSITESYPSQTESYQPRTEAYPVPQPEIKPYGGPDSGPDKPS
STFDLAIDNYLKDFGYGNQGRGYADYASFLDH

BO28122.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-PB 426 CG13114-PB 1..426 1..426 2263 100 Plus