BO28130.complete Sequence
922 bp assembled on 2011-07-18
GenBank Submission: KX795832
> BO28130.complete
GAAGTTATCAGTCGACATGTTTTCGATCAGAGTGTGGTTCATCTGCCTGG
TGATAGTTACCCTCAACTCCTTTCCCGCCTACTCCTGGGATTATTGCCAA
GAGCACTGGTGTCCGCGTTCCACCGACCACGTAGCGTGCAACAACAACGG
GACGTTTGGCCTCGATTGCGGAAGGGAGGCCAGGCTAATCCCGCTCAGCA
ATCAGTTGCAGGCGTTCATTGTGCACCAGGTAAACTTCTATCGCAACCAG
GTGGCTTCGGGCGGACTCTCCGCCTTCGGACCCGCCCGCCGAATGGCTAG
TGTCCGCTGGGATCCCGAGCTGGCACAGCTGGCTGAGCTGGCGGCAAAGA
GGTGCAGTTTGTCCGGCGATGGATGCCGCAACACCAGGCGATTCAAGCAC
GTGGGCCAGCTGACGGGCCACGTAATCTTCAGTGCGGGAAAGCACAGCGA
CTTGGAGCTGCTGCGCCACAAGATCTCGAATTGGTTTGGCCAGTACATGA
GAGCCAGCAAGGATCTGCAAGCCGCCGATCCATCAAGCAACATCAGCAGC
TTCCGGCAGTTGATACAGGAAAGCTCCACCCACATGGGATGCGGCGTGCT
CCGCCAGAGGAGCCACATGCTGTGGCACCAGCAGTTCATCGTCTGTAACT
TTGCCCGTAGGAATATGCCCCGCGAGCAGGTCTACCAGGTGGGCGTGGCT
GCCACAGGATGCAGGTCGGGAAGGAATCCTCGCTATCCCAATCTCTGCGC
TCTGCAGGAAGAATACGATGTGAACGCCGTCGACCGTTTTCACTCAAAGC
GGCCACTTAGGATAAGGTTCAAGTACAGCGCATCCCATCCATCGAAAGTT
TTGGGTGCTGATCGTGATGTAGCCTTCCATCCCAATATCAAGTTGGGACG
TCTTGCAAGCTTTCTAGACCAT
BO28130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:36:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3640-RA | 891 | CG3640-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:36:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3640-RA | 994 | CG3640-RA | 9..896 | 17..904 | 4440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:36:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24639905..24640658 | 151..904 | 3770 | 100 | Plus |
2R | 25286936 | 2R | 24639696..24639830 | 17..151 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:36:33 has no hits.
BO28130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 15:33:41 Download gff for
BO28130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3640-RA | 16..896 | 24..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:26 Download gff for
BO28130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3640-RA | 16..896 | 24..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:42 Download gff for
BO28130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3640-RA | 16..896 | 24..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:42 Download gff for
BO28130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24639703..24639830 | 24..151 | 100 | -> | Plus |
2R | 24639906..24640658 | 152..906 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:26 Download gff for
BO28130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20527226..20527353 | 24..151 | 100 | -> | Plus |
arm_2R | 20527429..20528181 | 152..906 | 99 | | Plus |
BO28130.pep Sequence
Translation from 16 to 922
> BO28130.pep
MFSIRVWFICLVIVTLNSFPAYSWDYCQEHWCPRSTDHVACNNNGTFGLD
CGREARLIPLSNQLQAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDP
ELAQLAELAAKRCSLSGDGCRNTRRFKHVGQLTGHVIFSAGKHSDLELLR
HKISNWFGQYMRASKDLQAADPSSNISSFRQLIQESSTHMGCGVLRQRSH
MLWHQQFIVCNFARRNMPREQVYQVGVAATGCRSGRNPRYPNLCALQEEY
DVNAVDRFHSKRPLRIRFKYSASHPSKVLGADRDVAFHPNIKLGRLASFL
DH
BO28130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3640-PA | 296 | CG3640-PA | 1..296 | 1..296 | 1596 | 100 | Plus |
CG17575-PA | 291 | CG17575-PA | 6..283 | 7..251 | 427 | 34.2 | Plus |
CG17575-PB | 298 | CG17575-PB | 6..290 | 7..251 | 420 | 33.3 | Plus |
CG42564-PA | 500 | CG10284-PA | 54..284 | 25..251 | 357 | 34.7 | Plus |
CG9822-PA | 263 | CG9822-PA | 13..259 | 11..253 | 345 | 33.2 | Plus |