BO28142.complete Sequence
589 bp assembled on 2011-06-17
GenBank Submission: KX795682
> BO28142.complete
GAAGTTATCAGTCGACATGCCGCAGGCCAATCTTACGTTAAGTCCCCATG
ATCAGCAGGTGCTCGATTCCATTTTCAATCCCCTCGAGCTTAGCAGCCTA
CAGACAAATAACTTAATTCCCGCTGAATCCGACCTGAAGGATGAGGAGCC
GGATACCCAGGCTATCAAAGCTTCCAGGGAACTGGAGCTAAAAGCCATCG
CCTTATCCGAAAGCGGGGAGCTTGATGGAGCACTGGAACTATTTCAACAA
TCATTAAATCTAGCCCAGAGGGCTTCCGTGCTTAATAATCGGGCACAAAC
TTTACGCCTAGCCAAACGTGATGAGGAGGCCCTCGATGACCTAAACAAAG
CCCTAGAACTGGCCAATGATCAGCAGACCCGCACCAAGTGCCATGCCCAT
TGTCAGCGAGGTGTCCTTTATCGTAAACTGGATAACTTGGAGGCGGCTCG
TGCCGATTTCGAGGCAGCAGCCCAGTTGGGCAGTAAATTCGCCAGAGAAC
AGTTGGTGGAAATCAATCCCTATGCAGCTCTCTGCAATCAAATGCTCCGT
CAGGCATTCGATCAACTCAAGGCAAGCTTTCTAGACCAT
BO28142.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:55:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14105-RA | 558 | CG14105-PA | 1..555 | 17..571 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:55:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14105-RA | 666 | CG14105-RA | 37..592 | 16..571 | 2780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:55:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13426327..13426637 | 326..16 | 1555 | 100 | Minus |
3L | 28110227 | 3L | 13426089..13426265 | 502..326 | 885 | 100 | Minus |
3L | 28110227 | 3L | 13425965..13426036 | 571..500 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:55:37 has no hits.
BO28142.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:54 Download gff for
BO28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14105-RA | 38..592 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:41 Download gff for
BO28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14105-RA | 38..592 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:57 Download gff for
BO28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14105-RA | 38..592 | 17..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:57 Download gff for
BO28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13425961..13426033 | 503..573 | 97 | <- | Minus |
3L | 13426089..13426264 | 327..502 | 100 | <- | Minus |
3L | 13426327..13426636 | 17..326 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:41 Download gff for
BO28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13419061..13419133 | 503..573 | 97 | <- | Minus |
arm_3L | 13419189..13419364 | 327..502 | 100 | <- | Minus |
arm_3L | 13419427..13419736 | 17..326 | 100 | | Minus |
BO28142.pep Sequence
Translation from 16 to 589
> BO28142.pep
MPQANLTLSPHDQQVLDSIFNPLELSSLQTNNLIPAESDLKDEEPDTQAI
KASRELELKAIALSESGELDGALELFQQSLNLAQRASVLNNRAQTLRLAK
RDEEALDDLNKALELANDQQTRTKCHAHCQRGVLYRKLDNLEAARADFEA
AAQLGSKFAREQLVEINPYAALCNQMLRQAFDQLKASFLDH
BO28142.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14105-PA | 185 | CG14105-PA | 1..185 | 1..185 | 920 | 100 | Plus |