BO28143.complete Sequence
637 bp assembled on 2011-06-17
GenBank Submission: KX794764
> BO28143.complete
GAAGTTATCAGTCGACATGATCTCACGACGCGACAAATTGCTGCAGCAGC
CGTGGGAGCAACTGCGGTACGCCCAGCACCGCGAGAAGGTCATGTCCGCC
CGCCCAGCCATTGACACCCACTCGCCGCGCGCCCACGAACACGTGCAGCG
CAAGTGGAAGAAGCAGCAAGTGGAGCGGGAGCGCCAGCAGCAGATCGAGC
GGGAGAACCTAAGACTCCTCCAGAAACTGGGCGACATCATGCGCACCAAG
CGCATCAACAATCTCTGGCTGGAGCCGCGGCCCAATTTTCTTAACCGCGA
GAAGCTTTTTGCCACCCGTCCGTACTCCAGCCTCCCGGAAGTGGTCACCA
TTTACGGAAAACAACCGCCGGGACCACTTATCTATGGCATGCTGCCCAAA
CCGGCGGTTGTGGGTCGGTGTCCCACCTGCAGCGGCAATCCGGAGCGCAC
CGAGGTGGCCATACCCGAGCAGCGAACTCCTTGGGCGCCCGAGAGAAAGT
CCTGGAACCGGAAGACCCAGGAGCAAGTAAAGCCGCATCGATGCTACCAC
TGCGGATCTGTAAAGACCAGCGAACGCAAGTACTTCGAGGAATTCTCCTA
CTCTTACTCCTACGACGAAGCAAGCTTTCTAGACCAT
BO28143.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14551-RB | 606 | CG14551-PB | 1..603 | 17..619 | 3015 | 100 | Plus |
CG14551-RA | 606 | CG14551-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14551-RB | 660 | CG14551-RB | 11..613 | 17..619 | 3015 | 100 | Plus |
CG14551-RA | 1432 | CG14551-RA | 783..1385 | 17..619 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:55:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26061315..26061648 | 619..286 | 1670 | 100 | Minus |
3R | 32079331 | 3R | 26061961..26062229 | 285..17 | 1345 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:55:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 672..712 | 202..162 | 115 | 75.6 | Minus |
BO28143.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:55 Download gff for
BO28143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14551-RA | 783..1385 | 17..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:43 Download gff for
BO28143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14551-RA | 783..1385 | 17..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:58 Download gff for
BO28143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14551-RA | 783..1385 | 17..621 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:58 Download gff for
BO28143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26061312..26061648 | 286..621 | 99 | <- | Minus |
3R | 26061961..26062229 | 17..285 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:43 Download gff for
BO28143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21887034..21887370 | 286..621 | 99 | <- | Minus |
arm_3R | 21887683..21887951 | 17..285 | 100 | | Minus |
BO28143.pep Sequence
Translation from 16 to 637
> BO28143.pep
MISRRDKLLQQPWEQLRYAQHREKVMSARPAIDTHSPRAHEHVQRKWKKQ
QVERERQQQIERENLRLLQKLGDIMRTKRINNLWLEPRPNFLNREKLFAT
RPYSSLPEVVTIYGKQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIP
EQRTPWAPERKSWNRKTQEQVKPHRCYHCGSVKTSERKYFEEFSYSYSYD
EASFLDH
BO28143.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14551-PB | 201 | CG14551-PB | 1..201 | 1..201 | 1093 | 100 | Plus |
CG14551-PA | 201 | CG14551-PA | 1..201 | 1..201 | 1093 | 100 | Plus |