BO28156.complete Sequence
397 bp assembled on 2011-06-17
GenBank Submission: KX798879
> BO28156.complete
GAAGTTATCAGTCGACATGGAGACGAAGTTCGTGGTCATAACTTTTCTAA
TAAGCTACGTACTTGCCCAATCGAATGCCGATTGTGGCAATAAGCCAATT
GTGGATGGAAATTGCGATCAGATAATCAAAGGATTTACTTTTGCAACCGA
AGAAAACCGATGCAAAAAGTTTAGAGCAAAGGGTTGCACAGTGGGCGGAA
ATTACTTTCGAGCCAAAGATGAGTGCGAGCTCAAATGCAAGGGTTATATA
AATTGGGGTATCGAAAGCTTCGGAAACGGAGATTGGGAAGAAAGTGAAAT
TGAGGACTATTGGAATAATGGTTCGGAAGAAAGCGAAGTCGAAAGCATCT
CGAATAGAGGATCGAAAAAACGAACTCTCGCAAGCTTTCTAGACCAT
BO28156.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:58:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Ba-RA | 366 | CG42461-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Ba-RA | 522 | CG42461-RA | 21..383 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:58:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3668116..3668418 | 379..77 | 1515 | 100 | Minus |
2L | 23513712 | 2L | 3668471..3668531 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:58:47 has no hits.
BO28156.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:59 Download gff for
BO28156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 21..383 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:22 Download gff for
BO28156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 21..383 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:59 Download gff for
BO28156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp24Ba-RA | 21..383 | 17..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:59 Download gff for
BO28156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668114..3668417 | 78..381 | 99 | <- | Minus |
2L | 3668471..3668531 | 17..77 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:22 Download gff for
BO28156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3668114..3668417 | 78..381 | 99 | <- | Minus |
arm_2L | 3668471..3668531 | 17..77 | 100 | | Minus |
BO28156.pep Sequence
Translation from 16 to 397
> BO28156.pep
METKFVVITFLISYVLAQSNADCGNKPIVDGNCDQIIKGFTFATEENRCK
KFRAKGCTVGGNYFRAKDECELKCKGYINWGIESFGNGDWEESEIEDYWN
NGSEESEVESISNRGSKKRTLASFLDH
BO28156.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp24Ba-PA | 121 | CG42461-PA | 1..121 | 1..121 | 659 | 100 | Plus |
Sfp24Bc-PA | 100 | CG42602-PA | 4..76 | 5..74 | 178 | 45.2 | Plus |
CG42463-PB | 111 | CG42463-PB | 8..77 | 6..75 | 174 | 45.7 | Plus |