BO28157.complete Sequence
454 bp assembled on 2011-06-17
GenBank Submission: KX796020
> BO28157.complete
GAAGTTATCAGTCGAGATGAAGGCCTTCATCGTTCTGGTTGCCCTGGCTA
TGGCCGCTCCTGCTCTTGGTCGCACCTTGGACCGTTGCTCCCTGGCCCGC
GAGATGTCCAACCTGGGCGTTCCTCGTGACCAATTGGCTCGTTGGGCCTG
TATTGCCGAGCACGAGTCCTCCTACCGCACCGGAGTGGTGGGTCCTGAGA
ACTACAACGGCTCCAACGACTACGGAATCTTCCAGATCAACAACTACTAC
TGGTGCGCTCCTCCCAGCGGTCGCTTCTCCTACAACGAGTGCGGATTGAG
CTGCAACGCCCTCTTGACCGACGACATCACCCACTCCGTTCGTTGCGCCC
AGAAGGTCCTTAGCCAGCAGGGATGGTCCGCCTGGTCCACCTGGCACTAC
TGCAGCGGATGGTTGCCGTCCATCGATGGCTGCTTCGCAAGCTTTCTAGA
CCAT
BO28157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:59:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LysE-RA | 423 | CG1180-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
| LysB-RB | 423 | CG1179-PB | 1..420 | 17..436 | 1875 | 96.4 | Plus |
| LysB-RA | 423 | CG1179-PA | 1..420 | 17..436 | 1875 | 96.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:59:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LysE-RA | 580 | CG1180-RA | 126..545 | 17..436 | 2100 | 100 | Plus |
| LysB-RB | 611 | CG1179-RB | 24..443 | 17..436 | 1875 | 96.4 | Plus |
| LysB-RA | 486 | CG1179-RA | 24..443 | 17..436 | 1875 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:59:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1212952..1213371 | 17..436 | 2100 | 100 | Plus |
| 3L | 28110227 | 3L | 1207394..1207813 | 17..436 | 1875 | 96.4 | Plus |
| 3L | 28110227 | 3L | 1210758..1211177 | 436..17 | 1800 | 95.2 | Minus |
| 3L | 28110227 | 3L | 1227772..1228191 | 17..436 | 950 | 82.7 | Plus |
| 3L | 28110227 | 3L | 1210485..1210726 | 17..258 | 850 | 90.1 | Plus |
| 3L | 28110227 | 3L | 1218286..1218607 | 410..89 | 665 | 80.4 | Minus |
| 3L | 28110227 | 3L | 1194874..1195241 | 435..68 | 595 | 77.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:59:07 has no hits.
BO28157.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:00 Download gff for
BO28157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysE-RA | 126..545 | 17..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:27 Download gff for
BO28157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysE-RA | 126..545 | 17..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:06 Download gff for
BO28157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysE-RA | 126..545 | 17..438 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:06 Download gff for
BO28157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1212952..1213371 | 17..438 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:27 Download gff for
BO28157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1212952..1213371 | 17..438 | 99 | | Plus |
BO28157.pep Sequence
Translation from 16 to 454
> BO28157.pep
MKAFIVLVALAMAAPALGRTLDRCSLAREMSNLGVPRDQLARWACIAEHE
SSYRTGVVGPENYNGSNDYGIFQINNYYWCAPPSGRFSYNECGLSCNALL
TDDITHSVRCAQKVLSQQGWSAWSTWHYCSGWLPSIDGCFASFLDH
BO28157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LysE-PA | 140 | CG1180-PA | 1..140 | 1..140 | 779 | 100 | Plus |
| LysB-PB | 140 | CG1179-PB | 1..140 | 1..140 | 762 | 97.1 | Plus |
| LysB-PA | 140 | CG1179-PA | 1..140 | 1..140 | 762 | 97.1 | Plus |
| LysD-PA | 140 | CG9118-PA | 1..140 | 1..140 | 755 | 96.4 | Plus |
| LysC-PA | 140 | CG9111-PA | 1..140 | 1..140 | 746 | 95 | Plus |
