BO28159.complete Sequence
721 bp assembled on 2011-06-17
GenBank Submission: KX798337
> BO28159.complete
GAAGTTATCAGTCGACATGCTGCGCCTACTGATCGTTTTGGGATTTTATA
TCCTGGGCTGCCGAGCAGCCTGCAATACCTGCAACGCTAATGGCGTGTCC
TGTATATCGGAAACGGAGTTTCAGTTCTGCTCCTCCGCCAGCGAACCCAT
CGGAAACCTCTACACCTGCCCCACCGGTTACTACTGCACAGAGAGCACGC
CCATTTGCAGCTCCGTGGCATCTTCGGCAGGTTGTACAGGATGCAATACG
TGCAGTTCGGATAATCGTTTTGCTTGCACCGGTCGGAATACCTTTGCGCT
GTGCCTAGGTACTTCTACACCCAGTACATCGATTGGCGGAAGCTGTGGCA
CTAATTATGTATGCAACGTGGGGAACGCCAATATCTGTGGCAGTCCTGCC
ACATACGCAGTATCCTGTTCCACATCAAGTACGTCAGACTGCGATACTAC
GGCCATCAAAAATGCCACCGAGTATTGTCAAACCATTCAAACAGCCGGAA
AATATCCTTATGGCGGAGATACCTCAACCACCTGCAGGCAATATGTGAAC
TGTTACACCGCTGCTGGTATTTTCTATGGAAATGTGTACACTTGTCCAGG
ACTCACCTACTTCGATAGTACCTCCAAACTTTGCACCACCCAAACGCAGG
CCAGATGCTCGGATACAGTGTCTTGTTTGACTCTCAATAACCGATTATTG
CCGGCAAGCTTTCTAGACCAT
BO28159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13309-RA | 690 | CG13309-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:56:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13309-RA | 800 | CG13309-RA | 17..703 | 17..703 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8810411..8810934 | 17..540 | 2620 | 100 | Plus |
| 3L | 28110227 | 3L | 8811006..8811168 | 541..703 | 815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:56:42 has no hits.
BO28159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:52:57 Download gff for
BO28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13309-RA | 17..703 | 17..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:02 Download gff for
BO28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13309-RA | 17..703 | 17..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:20 Download gff for
BO28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13309-RA | 17..703 | 17..705 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:20 Download gff for
BO28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8810411..8810934 | 17..540 | 100 | -> | Plus |
| 3L | 8811006..8811168 | 541..705 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:02 Download gff for
BO28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8803511..8804034 | 17..540 | 100 | -> | Plus |
| arm_3L | 8804106..8804268 | 541..705 | 98 | | Plus |
BO28159.pep Sequence
Translation from 16 to 721
> BO28159.pep
MLRLLIVLGFYILGCRAACNTCNANGVSCISETEFQFCSSASEPIGNLYT
CPTGYYCTESTPICSSVASSAGCTGCNTCSSDNRFACTGRNTFALCLGTS
TPSTSIGGSCGTNYVCNVGNANICGSPATYAVSCSTSSTSDCDTTAIKNA
TEYCQTIQTAGKYPYGGDTSTTCRQYVNCYTAAGIFYGNVYTCPGLTYFD
STSKLCTTQTQARCSDTVSCLTLNNRLLPASFLDH
BO28159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13309-PA | 229 | CG13309-PA | 1..229 | 1..229 | 1261 | 100 | Plus |
| CG13308-PB | 233 | CG13308-PB | 1..230 | 1..223 | 569 | 49.1 | Plus |
| CG13312-PA | 342 | CG13312-PA | 15..249 | 4..219 | 427 | 38 | Plus |
| CG13312-PA | 342 | CG13312-PA | 94..341 | 19..228 | 285 | 30.3 | Plus |
| CG32024-PA | 209 | CG32024-PA | 5..209 | 1..215 | 277 | 29.8 | Plus |
| CG14958-PA | 145 | CG14958-PA | 4..136 | 1..129 | 245 | 36.6 | Plus |
