BO28163.complete Sequence
478 bp assembled on 2011-06-17
GenBank Submission: KX797112
> BO28163.complete
GAAGTTATCAGTCGACATGGACGGTCACAGCTGGCTTCACTTCAGCAACG
GAGCAATCCCCCAGGCAGCCGTTGTGGCTGGTCACGATTCCGATGGCGAC
ACCATCTTCATTGGCCGCGCCTTCTACTGCAACGACATGCTGCCGGCCAA
GATTATCCCCAACAAGGGCAAGGCCTACGTGGCGTATGCCAACCAGGAGG
TGGAGCTGGAGAACTACGAGGTACTCAGCGGCTTCAACTACGAGTGGCTG
CCGGCCGAGAACGGAGAGGTGCCTCCCGGCGCCGTCAAGGTCGGCCAGAA
TGTCGACGGAGAGACCTTGTACGCCGGAAGGGGCTACCATGCCGGCAGTT
TGACCGTGGGCAAGGTGCATCCGTCCCACGGCTGCCTGTACATTCCCTAC
GATTCCGAGGAGGTTAAGATATTCGCCTACGAGGTTCTGTCCCGTCGCTT
GGAGGCGAGAGCAAGCTTTCTAGACCAT
BO28163.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:04:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31086-RB | 447 | CG31086-PB | 1..444 | 17..460 | 2220 | 100 | Plus |
CG31086-RA | 447 | CG31086-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
CG32633-RB | 858 | CG32633-PB | 52..424 | 68..440 | 1055 | 85.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:04:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31086-RB | 906 | CG31086-RB | 401..853 | 8..460 | 2235 | 99.6 | Plus |
CG31086-RA | 527 | CG31086-RA | 22..474 | 8..460 | 2235 | 99.6 | Plus |
CG31323-RA | 3489 | CG31323-RA | 1919..2356 | 23..460 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:04:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26185737..26186174 | 23..460 | 2190 | 100 | Plus |
X | 23542271 | X | 13562010..13562382 | 68..440 | 1055 | 85.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:04:42 has no hits.
BO28163.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:12 Download gff for
BO28163.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31086-RA | 23..466 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:51 Download gff for
BO28163.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31086-RA | 31..474 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:05 Download gff for
BO28163.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31086-RA | 31..474 | 17..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:05 Download gff for
BO28163.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26185732..26186174 | 17..462 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:51 Download gff for
BO28163.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22011454..22011896 | 17..462 | 98 | | Plus |
BO28163.pep Sequence
Translation from 16 to 478
> BO28163.pep
MDGHSWLHFSNGAIPQAAVVAGHDSDGDTIFIGRAFYCNDMLPAKIIPNK
GKAYVAYANQEVELENYEVLSGFNYEWLPAENGEVPPGAVKVGQNVDGET
LYAGRGYHAGSLTVGKVHPSHGCLYIPYDSEEVKIFAYEVLSRRLEARAS
FLDH
BO28163.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31086-PB | 148 | CG31086-PB | 1..148 | 1..148 | 797 | 100 | Plus |
CG31086-PA | 148 | CG31086-PA | 1..148 | 1..148 | 797 | 100 | Plus |
CG32633-PB | 285 | CG32633-PB | 1..141 | 1..141 | 664 | 84.4 | Plus |
CG32633-PA | 285 | CG32633-PA | 1..141 | 1..141 | 664 | 84.4 | Plus |
CG32633-PB | 285 | CG32633-PB | 147..284 | 6..143 | 430 | 55.8 | Plus |
CG32633-PA | 285 | CG32633-PA | 147..284 | 6..143 | 430 | 55.8 | Plus |
CG13321-PB | 286 | CG13321-PB | 1..142 | 1..141 | 417 | 52.1 | Plus |
CG32633-PB | 285 | CG32633-PB | 215..282 | 3..70 | 153 | 39.7 | Plus |
CG32633-PA | 285 | CG32633-PA | 215..282 | 3..70 | 153 | 39.7 | Plus |
CG32633-PB | 285 | CG32633-PB | 3..71 | 74..142 | 151 | 40.6 | Plus |
CG32633-PA | 285 | CG32633-PA | 3..71 | 74..142 | 151 | 40.6 | Plus |