BO28169.complete Sequence
751 bp assembled on 2011-06-21
GenBank Submission: KX798851
> BO28169.complete
GAAGTTATCAGTCGACATGTTCATCCAAAGCTTCCTGTTGCTATTGGCGC
TCAATTCCCTGTCCGCAGGACCAGTAATCCGGCCGGAAGAACGCATTATC
GGTGGACAACCCATTGGAATCGAGGAGGCACCATGGCAGGTGTCCATACA
ACGTGATGGCAAACATTTATGCGGTGGCTCCATTTACAGCGCAGATATCA
TCATTACTGCGGCCCATTGCGTCCAGGGCCAGGGATATCAAGTTCGGGCA
GGATCCGCCTTGAAGAACTCCAATGGAAGTGTTGTCGATGTGGCCGCTAT
AAGGACGCATGAGGGATTAGGAAACGACATCGCCATCGTGCGGCTAAGTA
AGCCACTTGAGTTCACAAACCAAGTTCAGCCCATTCCATTGGCCAAGACA
AATCCCCCGCCTGGATCGATTGCCTTCGTCTCTGGCTGGGGAAGTTCTTC
TTATTACTCACATCCCATCGATCTTCAAGGAGTAAACCTTTACATTCAAT
GGCCGTACTATTGTGGATTAACTGAACCGTCAAGAATATGCGCCGGATCT
TTTGGAAGGGCGGCTTGTAAAGGAGACTCTGGTGGACCGTTGGTGTTTGA
CCAACAACTTGTGGGTGTTGTATCCGGGGGTACAAAGGATTGCACGTATA
GTTCAATCTACACTAGTGTCCCATATTTCCGTGAATGGATCTTAAATGCT
ATCGATGAAATAATGTCAGCGAATCGAAACAAAGCAAGCTTTCTAGACCA
T
BO28169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:23:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Send2-RA | 720 | CG18125-PA | 1..717 | 17..733 | 3585 | 100 | Plus |
CG17234-RA | 756 | CG17234-PA | 1..203 | 17..219 | 445 | 81.3 | Plus |
CG17234-RA | 756 | CG17234-PA | 345..465 | 322..442 | 365 | 86.8 | Plus |
CG17234-RA | 756 | CG17234-PA | 575..740 | 537..702 | 305 | 78.9 | Plus |
CG17234-RA | 756 | CG17234-PA | 237..310 | 229..302 | 205 | 85.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:23:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Send2-RA | 774 | CG18125-RA | 35..751 | 17..733 | 3585 | 100 | Plus |
CG17234-RA | 808 | CG17234-RA | 29..237 | 11..219 | 460 | 81.3 | Plus |
CG17234-RA | 808 | CG17234-RA | 379..499 | 322..442 | 365 | 86.8 | Plus |
CG17234-RA | 808 | CG17234-RA | 609..774 | 537..702 | 305 | 78.9 | Plus |
CG17234-RA | 808 | CG17234-RA | 271..344 | 229..302 | 205 | 85.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:23:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14345938..14346654 | 733..17 | 3585 | 100 | Minus |
2L | 23513712 | 2L | 2253073..2253281 | 11..219 | 460 | 81.3 | Plus |
2L | 23513712 | 2L | 2253423..2253543 | 322..442 | 365 | 86.8 | Plus |
2L | 23513712 | 2L | 2253653..2253818 | 537..702 | 305 | 78.9 | Plus |
2L | 23513712 | 2L | 2253315..2253388 | 229..302 | 205 | 85.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:23:11 has no hits.
BO28169.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 12:42:03 Download gff for
BO28169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18125-RA | 6..717 | 22..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:05 Download gff for
BO28169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Send2-RA | 40..751 | 22..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:08 Download gff for
BO28169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Send2-RA | 40..751 | 22..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:08 Download gff for
BO28169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14345936..14346649 | 22..735 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:05 Download gff for
BO28169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14345936..14346649 | 22..735 | 99 | | Minus |
BO28169.pep Sequence
Translation from 16 to 751
> BO28169.pep
MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKH
LCGGSIYSADIIITAAHCVQGQGYQVRAGSALKNSNGSVVDVAAIRTHEG
LGNDIAIVRLSKPLEFTNQVQPIPLAKTNPPPGSIAFVSGWGSSSYYSHP
IDLQGVNLYIQWPYYCGLTEPSRICAGSFGRAACKGDSGGPLVFDQQLVG
VVSGGTKDCTYSSIYTSVPYFREWILNAIDEIMSANRNKASFLDH
BO28169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Send2-PA | 239 | CG18125-PA | 1..239 | 1..239 | 1258 | 100 | Plus |
CG17234-PA | 251 | CG17234-PA | 1..250 | 1..232 | 747 | 62.8 | Plus |
Send1-PA | 255 | CG17012-PA | 1..244 | 1..230 | 523 | 47.1 | Plus |
alphaTry-PA | 256 | CG18444-PA | 30..256 | 26..232 | 431 | 44.7 | Plus |
CG30025-PA | 253 | CG30025-PA | 4..251 | 6..227 | 425 | 40.2 | Plus |