BO28172.complete Sequence
370 bp assembled on 2011-06-17
GenBank Submission: KX797494
> BO28172.complete
GAAGTTATCAGTCGACATGGCGAACTATTACTATTTCGACATCAAACTTA
AACTTCGGGATCCGACTGCAGTTGCTTTGACCCCATCTCTGTTTCGAAGC
TGCGTTCTTGACGCCCTGGACAGTTTCTTCTGCGAGGAGAAACCCACACT
GGAGATCGTGAAGTTCTGCGCCCAGCAACATCGTGTTATCTTTCGAGTGC
CAGAGCAACTGCACGACATGACCCGCATATCCATTGAGCTCATCGGTCAC
TACCAGCAGATACCCTGTCATTTTGAGATCTTGGAAACATCCAAATCATC
GCTGGACTTTGAGAAGAGCATTGAAAAGACTGTCGCGGTTGTGTCCGATG
ATGCAAGCTTTCTAGACCAT
BO28172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:59:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15526-RA | 339 | CG15526-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:59:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15526-RA | 566 | CG15526-RA | 179..515 | 16..352 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:59:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30056249..30056552 | 49..352 | 1520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:59:27 has no hits.
BO28172.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:01 Download gff for
BO28172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15526-RA | 1..336 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:32 Download gff for
BO28172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15526-RA | 180..515 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:13 Download gff for
BO28172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15526-RA | 180..515 | 17..354 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:13 Download gff for
BO28172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30056136..30056167 | 17..48 | 100 | -> | Plus |
3R | 30056249..30056552 | 49..354 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:32 Download gff for
BO28172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25881858..25881889 | 17..48 | 100 | -> | Plus |
arm_3R | 25881971..25882274 | 49..354 | 99 | | Plus |
BO28172.pep Sequence
Translation from 16 to 370
> BO28172.pep
MANYYYFDIKLKLRDPTAVALTPSLFRSCVLDALDSFFCEEKPTLEIVKF
CAQQHRVIFRVPEQLHDMTRISIELIGHYQQIPCHFEILETSKSSLDFEK
SIEKTVAVVSDDASFLDH
BO28172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:31:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15526-PA | 112 | CG15526-PA | 1..112 | 1..112 | 581 | 100 | Plus |
CG34317-PA | 111 | CG34317-PA | 1..109 | 1..107 | 283 | 51.4 | Plus |