BO28173.complete Sequence
490 bp assembled on 2011-06-17
GenBank Submission: KX799816
> BO28173.complete
GAAGTTATCAGTCGACATGACAGCCTTCAATAGGGATCATCACTTCGCGT
TTCTAATGATCGTTGCCCTCGTGGGAAGTAGCTGTATTTTAGGATTTTCC
GATGCCCAAACCTTCACAGCCGAGGATCGTAGCTCTATACAGAAATTCAT
GGATTCATTGTTGAACTTCCTGGAACTGGAAATTAGTAATATAACAACCA
CATTGCCGCCAACTTCGAATGGCACTACCTTGGAGACCACTACTCTGGCA
CCTGGAAATTCCACAGAAGTGACCACAGAGGTTTCGCAAACATCTACTAA
CTCCACATCGAGTGCCTTGGATACGACCACGAGCAGTTTGAATTCCACAA
CGGAGGATAGCGAAAATACAACCGCAACCACAACCACCGAAGCAAATCCC
ACTACTATGAGGCGCAGGATTTGCTTCAAGCGTTTCTGCTACAAGTTTAG
CAACGACAAGGGTTACATAGTTGCAAGCTTTCTAGACCAT
BO28173.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15571-RA | 459 | CG15571-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15571-RA | 522 | CG15571-RA | 37..497 | 12..472 | 2290 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4216898..4217358 | 472..12 | 2290 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:08:06 has no hits.
BO28173.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:16 Download gff for
BO28173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15571-RA | 1..456 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:34 Download gff for
BO28173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15571-RA | 42..497 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:08 Download gff for
BO28173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15571-RA | 42..497 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:08 Download gff for
BO28173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4216896..4217353 | 17..474 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:34 Download gff for
BO28173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4110929..4111386 | 17..474 | 99 | | Minus |
BO28173.pep Sequence
Translation from 16 to 490
> BO28173.pep
MTAFNRDHHFAFLMIVALVGSSCILGFSDAQTFTAEDRSSIQKFMDSLLN
FLELEISNITTTLPPTSNGTTLETTTLAPGNSTEVTTEVSQTSTNSTSSA
LDTTTSSLNSTTEDSENTTATTTTEANPTTMRRRICFKRFCYKFSNDKGY
IVASFLDH
BO28173.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15571-PA | 152 | CG15571-PA | 1..152 | 1..152 | 770 | 100 | Plus |