BO28174.complete Sequence
1264 bp assembled on 2011-06-17
GenBank Submission: KX799322
> BO28174.complete
GAAGTTATCAGTCGACATGAGAGTCAGGTGGAACCATTTCAAGTTATTGC
TGTTTTGGCTAACGGTTTTAGCTGTCTTGGCCTTTGAAGCCGAGGCCAGG
AAGCGTGTTAGGATTGGATTGCACAAGAATCCTGAACCAATTGAGGAGAA
CATAAAGAACGAATTGAAGACCCTTTCCATTAAACACAATTTAAATGTTG
ATGATACAAAAGCTAAAACGAAAACAGATACCAAGGTCCCAGGATCAAAA
GTCGCAACGCTAGAAAATCTATACAACACGGAGTACTACACCACATTAGG
ATTCGGAAATCCGCCGCAGGATTTGAAAGTGCTGATCGACACTGGTTCGG
CGAATCTCTGGGTGCTGTCATCCAAGTGTCCAGACTCGGTTGCACCCTGT
GCCAATCGCATAAAGTACAACTCAAGTGCTTCCACAACCTACAGGGCTAT
CAATACCGCATTCAATATTGCATACGGTTCCAATTCAGAGGAAGGACCTA
TTGCACTCTCCGGCTTTCAGTCCCAGGACACAGTAAACTTCGCCGGATAC
TCCATTAAAAATCAGATCTTCGCCGAAATCACCAATGCACCAGAGACCGC
ATTTCTGAAGTCCCAGCTCGATGGAATTTTGGGATTGGGGTTCGCCAGCA
TAGCCATTAATAGTATTACCCCACCCTTCTACAACTTAATGGCCCAAGGT
CTAGTAAACCGATCTGTGTTTTCGATCTACTTGAATAGAAATGGCACCAA
TGCCATTAACGGTGGGGAGCTGATCCTGGGAGGATCGGATTCGGGTCTGT
ACAGCGGGTGTTTGACCTATGTGCCAGTTTCCAGCGCAGGATACTGGCAG
TTTACAATGACTAGTGCCAATCTGAATGGATTTCAGTTTTGTGAGAACTG
CGAGGCCATACTCGATGTAGGCACTTCCCTAATTGTTGTGCCTGAGCAAG
TCCTAGATACCATCAACCAAATATTGGGAGTTCTCAACCCGACGGCTTCG
AATGGAGTCTTTTTAGTGGATTGCTCCTCGATCGGCGATCTTCCGGACAT
TGTCTTCACCGTTGCGCGCCGGAAGTTCCCCTTGAAGTCTAGCGACTACG
TGCTCCGATATGGAAATACTTGTGTCTCGGGATTCACCAGCATGAACGGC
AACTCCTTGTTGATTCTGGGCGAGATCTTCCTGGGCGCCTACTATACGAC
CTACGATATTGTCTACAAACTCATTGGACTGGCACCAGCAATTCATGCAA
GCTTTCTAGACCAT
BO28174.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31926-RB | 1233 | CG31926-PB | 1..1230 | 17..1246 | 6135 | 99.9 | Plus |
| CG31926-RA | 1233 | CG31926-PA | 1..1230 | 17..1246 | 6135 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31926-RB | 1612 | CG31926-RB | 287..1517 | 16..1246 | 6140 | 99.9 | Plus |
| CG31926-RA | 1343 | CG31926-RA | 18..1248 | 16..1246 | 6140 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1495746..1496976 | 16..1246 | 6140 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:08:27 has no hits.
BO28174.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:16 Download gff for
BO28174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 1..1230 | 17..1248 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:38 Download gff for
BO28174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 19..1248 | 17..1248 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:14 Download gff for
BO28174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 19..1248 | 17..1248 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:14 Download gff for
BO28174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1495747..1496976 | 17..1248 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:38 Download gff for
BO28174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1495747..1496976 | 17..1248 | 99 | | Plus |
BO28174.pep Sequence
Translation from 16 to 1264
> BO28174.pep
MRVRWNHFKLLLFWLTVLAVLAFEAEARKRVRIGLHKNPEPIEENIKNEL
KTLSIKHNLNVDDTKAKTKTDTKVPGSKVATLENLYNTEYYTTLGFGNPP
QDLKVLIDTGSANLWVLSSKCPDSVAPCANRIKYNSSASTTYRAINTAFN
IAYGSNSEEGPIALSGFQSQDTVNFAGYSIKNQIFAEITNAPETAFLKSQ
LDGILGLGFASIAINSITPPFYNLMAQGLVNRSVFSIYLNRNGTNAINGG
ELILGGSDSGLYSGCLTYVPVSSAGYWQFTMTSANLNGFQFCENCEAILD
VGTSLIVVPEQVLDTINQILGVLNPTASNGVFLVDCSSIGDLPDIVFTVA
RRKFPLKSSDYVLRYGNTCVSGFTSMNGNSLLILGEIFLGAYYTTYDIVY
KLIGLAPAIHASFLDH
BO28174.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31926-PB | 410 | CG31926-PB | 1..410 | 1..410 | 2120 | 100 | Plus |
| CG31926-PA | 410 | CG31926-PA | 1..410 | 1..410 | 2120 | 100 | Plus |
| Bace-PB | 372 | CG13095-PB | 5..370 | 15..407 | 767 | 42.4 | Plus |
| Bace-PA | 372 | CG13095-PA | 5..370 | 15..407 | 767 | 42.4 | Plus |
| CG31928-PB | 418 | CG31928-PB | 30..418 | 28..409 | 765 | 41.5 | Plus |
