Clone BO28177 Report

Search the DGRC for BO28177

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:281
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG12517-RA
Protein status:BO28177.pep: Imported from assembly
Sequenced Size:448

Clone Sequence Records

BO28177.complete Sequence

448 bp assembled on 2011-06-17

GenBank Submission: KX798668

> BO28177.complete
GAAGTTATCAGTCGACATGAGTAACCTGGGATCAATACTGCTCCTTCTGC
TCATCATCTGTATCGAACGCTCGCGACAGCAACGCTTCTCGCATCCCGAA
TCCTGGACGGATAATGGGATTTACGTTCCCGGTTCGGAGGACGACCTGGA
CTGGACGGGCGCCAATTGGCAGCTGGTGGTCCGCTTTCTGATGCAGCGCC
AGCAGCTGCGTTTCTGCATCGCACTGGCCAGATTCGATGAGCAATTGGTG
CCCGGCACAGCCTGCCAGGCTCTTTTGGCCAACGGCCCGCTTATGGCCAA
CTGCGATATTGGCAACATCGAGGATCTGACCATGACCTTGCGCTATGCCT
TCGGCGAAATTCTGCTGGACACAAGTCGAAAATGCCGTCCTGGCTTGGAG
CTATTCGGAGTTCGCTGCAGGCGGAGGGCAGCAAGCTTTCTAGACCAT

BO28177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:08:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG12517-RA 417 CG12517-PA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:08:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG12517-RA 556 CG12517-RA 74..487 17..430 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10870240..10870653 17..430 2070 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:08:47 has no hits.

BO28177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:17 Download gff for BO28177.complete
Subject Subject Range Query Range Percent Splice Strand
CG12517-RA 74..487 17..432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:43 Download gff for BO28177.complete
Subject Subject Range Query Range Percent Splice Strand
CG12517-RA 74..487 17..432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:20 Download gff for BO28177.complete
Subject Subject Range Query Range Percent Splice Strand
CG12517-RA 74..487 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:20 Download gff for BO28177.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10870240..10870653 17..432 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:43 Download gff for BO28177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10870240..10870653 17..432 99   Plus

BO28177.pep Sequence

Translation from 16 to 448

> BO28177.pep
MSNLGSILLLLLIICIERSRQQRFSHPESWTDNGIYVPGSEDDLDWTGAN
WQLVVRFLMQRQQLRFCIALARFDEQLVPGTACQALLANGPLMANCDIGN
IEDLTMTLRYAFGEILLDTSRKCRPGLELFGVRCRRRAASFLDH

BO28177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12517-PA 138 CG12517-PA 1..138 1..138 728 100 Plus