BO28181.complete Sequence
376 bp assembled on 2011-06-17
GenBank Submission: KX797940
> BO28181.complete
GAAGTTATCAGTCGACATGCGATGGCAGTTGGCAATTATGTGGCTTTTCG
CCTCCGCGTTTGCAGTACCTTTCATAAAGTGGCGCCGCCAAATAGTTACG
CCGAAGCACTTGATGGCACCACCTTTGTCACCCATCGCACAGGACAAGGT
TGTGGTCACCCCGCAGAAGCTTAGAGAAGTGGCTGACTTTAAGGCCATGA
TCCAAAAGGCCGTCGATGAGAACACTTACGTGGTGGCCGCTGCACCATCA
AAGGATTTTCTAGCGACACTGGGTGGAAATTGGGGAGCACCTATATCCTT
GCCTCACTCCTGGACCGCGCCAGCCTTTAATCTTACCTTTTTTTGGCATG
GATTTGGCGCAAGCTTTCTAGACCAT
BO28181.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:09:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17169-RB | 345 | CG17169-PB | 1..342 | 17..358 | 1695 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:09:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17169-RB | 532 | CG17169-RB | 18..359 | 17..358 | 1695 | 99.7 | Plus |
CG17159-RF | 4662 | CG17159-RF | 4259..4365 | 358..252 | 535 | 100 | Minus |
CG17162-RH | 4590 | CG17162-RH | 4187..4293 | 358..252 | 535 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:09:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 23084689..23084926 | 17..254 | 1175 | 99.6 | Plus |
X | 23542271 | X | 23085257..23085363 | 252..358 | 535 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:09:16 has no hits.
BO28181.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:17 Download gff for
BO28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17169-RB | 18..359 | 17..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:48 Download gff for
BO28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17169-RB | 18..359 | 17..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:29 Download gff for
BO28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17169-RB | 18..359 | 17..360 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:29 Download gff for
BO28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 23084689..23084925 | 17..253 | 99 | -> | Plus |
X | 23085259..23085363 | 254..360 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:48 Download gff for
BO28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
XHet | 63507..63743 | 17..253 | 99 | -> | Plus |
XHet | 64077..64181 | 254..360 | 98 | | Plus |
BO28181.pep Sequence
Translation from 16 to 376
> BO28181.pep
MRWQLAIMWLFASAFAVPFIKWRRQIVTPKHLMAPPLSPIAQDKVVVTPQ
KLREVADFKAMIQKAVDENTYVVAAAPSKDFLATLGGNWGAPISLPHSWT
APAFNLTFFWHGFGASFLDH
BO28181.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17169-PB | 114 | CG17169-PB | 1..114 | 1..114 | 613 | 100 | Plus |