BO28184.complete Sequence
481 bp assembled on 2011-09-14
GenBank Submission: KX800094
> BO28184.complete
GAAGTTATCAGTCGACATGAAAGTATTCGTATGTCTTCTGGCTCTGACAG
CCATCCTGGCAACCGCCAACGCCGGTCTCCTCAGTCTGCTCAAGGGAGGC
GGTGGTGGTGGTGGCGGTGGCTATGGCGGCGGATACGGTGGTGGCTACGG
CGGCGGCTACGGAGGTGGTGGGTATGGAGGCGAGAGCACCGTGAAGGTCA
TTAAAGTGATAACCGATTCCGGAGCTGGCGGTGGCTACCGCGGAGGATAC
GCAGGTGGCTATGGAGGTGGCTACGGAGGTGGCTACGGAGGTGCCTACGG
TGGTGGCTACGGAGGTGGCAGCACTGTTAAAATTATTAAAGTGATCACCG
ATTCCGGATCCGGCTACGGAGGTGGATACGGTGGAGGTGGCTGGACCTCG
GGCAGCTACGGGGGCAGTTACGCTGGTGGCTACGGTGGTCAGTCCGGATG
GTGGAAGACGAAGGCAAGCTTTCTAGACCAT
BO28184.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:12:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15597-RB | 450 | CG15597-PB | 1..447 | 17..463 | 2235 | 100 | Plus |
| CG14191-RA | 582 | CG14191-PA | 171..332 | 136..291 | 290 | 81.5 | Plus |
| CG14191-RA | 582 | CG14191-PA | 271..336 | 254..319 | 210 | 87.9 | Plus |
| CG15597-RB | 450 | CG15597-PB | 100..207 | 254..358 | 190 | 80.6 | Plus |
| CG15597-RB | 450 | CG15597-PB | 238..342 | 116..223 | 190 | 80.6 | Plus |
| CG15597-RB | 450 | CG15597-PB | 214..277 | 254..317 | 185 | 85.9 | Plus |
| CG15597-RB | 450 | CG15597-PB | 238..301 | 230..293 | 185 | 85.9 | Plus |
| CG14191-RA | 582 | CG14191-PA | 267..324 | 262..319 | 185 | 87.9 | Plus |
| CG14191-RA | 582 | CG14191-PA | 283..368 | 230..315 | 175 | 80.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:12:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15597-RB | 679 | CG15597-RB | 41..487 | 17..463 | 2235 | 100 | Plus |
| CG14191-RA | 787 | CG14191-RA | 250..411 | 136..291 | 290 | 81.5 | Plus |
| CG14191-RA | 787 | CG14191-RA | 350..415 | 254..319 | 210 | 87.9 | Plus |
| CG15597-RB | 679 | CG15597-RB | 140..247 | 254..358 | 190 | 80.6 | Plus |
| CG15597-RB | 679 | CG15597-RB | 278..382 | 116..223 | 190 | 80.6 | Plus |
| CG15597-RB | 679 | CG15597-RB | 254..317 | 254..317 | 185 | 85.9 | Plus |
| CG15597-RB | 679 | CG15597-RB | 278..341 | 230..293 | 185 | 85.9 | Plus |
| CG14191-RA | 787 | CG14191-RA | 346..403 | 262..319 | 185 | 87.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6284654..6285094 | 463..23 | 2205 | 100 | Minus |
| X | 23542271 | X | 19082029..19082190 | 136..291 | 290 | 81.5 | Plus |
| X | 23542271 | X | 19082129..19082194 | 254..319 | 210 | 87.9 | Plus |
| 3R | 32079331 | 3R | 6284759..6284863 | 223..116 | 190 | 80.6 | Minus |
| 3R | 32079331 | 3R | 6284894..6285001 | 358..254 | 190 | 80.6 | Minus |
| 3R | 32079331 | 3R | 6284800..6284863 | 293..230 | 185 | 85.9 | Minus |
| 3R | 32079331 | 3R | 6284824..6284887 | 317..254 | 185 | 85.9 | Minus |
| X | 23542271 | X | 19082125..19082182 | 262..319 | 185 | 87.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:12:32 has no hits.
BO28184.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 11:59:10 Download gff for
BO28184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15597-RB | 41..487 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:45 Download gff for
BO28184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15597-RB | 41..487 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:46 Download gff for
BO28184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15597-RB | 41..487 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:46 Download gff for
BO28184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6284651..6285100 | 17..465 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:45 Download gff for
BO28184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2110373..2110822 | 17..465 | 98 | | Minus |
BO28184.pep Sequence
Translation from 16 to 481
> BO28184.pep
MKVFVCLLALTAILATANAGLLSLLKGGGGGGGGGYGGGYGGGYGGGYGG
GGYGGESTVKVIKVITDSGAGGGYRGGYAGGYGGGYGGGYGGAYGGGYGG
GSTVKIIKVITDSGSGYGGGYGGGGWTSGSYGGSYAGGYGGQSGWWKTKA
SFLDH
BO28184.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15597-PB | 149 | CG15597-PB | 1..149 | 1..149 | 829 | 100 | Plus |
| CG14191-PA | 193 | CG14191-PA | 1..188 | 1..145 | 449 | 53.4 | Plus |
| CG12523-PB | 250 | CG12523-PB | 1..158 | 1..148 | 339 | 50.6 | Plus |
| CG12523-PA | 250 | CG12523-PA | 1..158 | 1..148 | 339 | 50.6 | Plus |
| CG15731-PA | 319 | CG15731-PA | 1..199 | 1..144 | 317 | 41.8 | Plus |
