BO28186.complete Sequence
655 bp assembled on 2011-06-17
GenBank Submission: KX800134
> BO28186.complete
GAAGTTATCAGTCGACATGATTAAACTTATGTCAGTTAAATACCGCCTAT
GTTCTCTGGGAAGTTCCTACGAAGTGATTGAAGATGCCTGCCGGGATAGA
TCAGGTTTCTTTAGTTTATTGGAATCCAGGAAATTCAGGATTGTGAGGCG
CTGCTTTGCGAAATACCTGAGTGAAGGCATACCCTCTTATCCTATATATT
ATTGGTTCGTCCTCATATTTAGTCTATACGGAGCGTTTAGGAGGTCAATC
CTCACCAATAAGGTTGATGGGAGCTTCGAAAATCCAAAAAATAAGAGAAG
ACTCAGAATGGCTGGAGCATTTATACAAGCCAATATCTGGATGCATCTGT
TGTATGCGGCTTTATTGGTTTCACCTCATCACATGGCTCCCTGGTTATTC
GTCCATTTGGGGATACTTGCTTGCAAGTTGACTGCGGCGACCATTAAAGG
ACACTTCAGATGCCAGGGTGATCTTCGAACCCGGACCACAATAAATGCAA
TTGTATATGTGCTGGTTATAGGTCTAGTTTACCTGGCTATGAGGTCATTT
ACCACTGCCTTAGCAAGGGATGTTCCAGAAAACCTAAGGCTCTGCTTGAA
ATTCATAAATCCTTTGCTCAAATATGTAAGAGGCCATGCAAGCTTTCTAG
ACCAT
BO28186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:10:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43049-RB | 624 | CG43049-PB | 1..621 | 17..637 | 3105 | 100 | Plus |
CG43049-RA | 642 | CG43049-PA | 1..639 | 17..637 | 2890 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43049-RB | 724 | CG43049-RB | 79..699 | 17..637 | 3105 | 100 | Plus |
CG43049-RA | 743 | CG43049-RA | 80..718 | 17..637 | 2890 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18925813..18926083 | 367..637 | 1355 | 100 | Plus |
3L | 28110227 | 3L | 18925169..18925387 | 17..235 | 1095 | 100 | Plus |
3L | 28110227 | 3L | 18925453..18925587 | 235..369 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:10:04 has no hits.
BO28186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:53:18 Download gff for
BO28186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 79..699 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:57 Download gff for
BO28186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 79..699 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:43 Download gff for
BO28186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 79..699 | 17..639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:43 Download gff for
BO28186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18925169..18925387 | 17..235 | 100 | -> | Plus |
3L | 18925454..18925585 | 236..367 | 100 | -> | Plus |
3L | 18925814..18926083 | 368..639 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:57 Download gff for
BO28186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18918269..18918487 | 17..235 | 100 | -> | Plus |
arm_3L | 18918554..18918685 | 236..367 | 100 | -> | Plus |
arm_3L | 18918914..18919183 | 368..639 | 99 | | Plus |
BO28186.pep Sequence
Translation from 16 to 655
> BO28186.pep
MIKLMSVKYRLCSLGSSYEVIEDACRDRSGFFSLLESRKFRIVRRCFAKY
LSEGIPSYPIYYWFVLIFSLYGAFRRSILTNKVDGSFENPKNKRRLRMAG
AFIQANIWMHLLYAALLVSPHHMAPWLFVHLGILACKLTAATIKGHFRCQ
GDLRTRTTINAIVYVLVIGLVYLAMRSFTTALARDVPENLRLCLKFINPL
LKYVRGHASFLDH
BO28186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43049-PB | 207 | CG43049-PB | 1..207 | 1..207 | 1081 | 100 | Plus |
CG43049-PA | 213 | CG43049-PA | 1..213 | 1..207 | 1064 | 97.2 | Plus |