BO28195.complete Sequence
403 bp assembled on 2011-06-21
GenBank Submission: KX796417
> BO28195.complete
GAAGTTATCAGTCGACATGCGAACGGTGCCCATCTTGTTGCTAATTTGCT
GCCTAGGCTGGTTACACAAAGGCCAAGCTGACGAAAGGAAGATTGGCGCT
GTGGGTCCGCCTATGAAACAGAGGAGTCTTCGACATGTAAGCTCCTTTGC
TAATCCAGGGCAACCGGGTAGACCTGGCAGCGGAAGACCAGGACGACCTG
GTCAGGGAATGCCTGGCCGACCTGGGCGTCCAGGAGGATCAGGTGGAGCT
GGAGGAGCCGGAGGAAGTGGAGGTGATGGAGGAGCAGGTGGGGCTGGCGC
ACGACCAGTAAGAGGAGGGTATTGGAGGAAAGGTATTTCATTGGGTCAAA
GGCGACCAGAGCCAAGGTCAAAATATTATTTGTATGCAAGCTTTCTAGAC
CAT
BO28195.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42521-RA | 372 | CG42521-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42521-RA | 457 | CG42521-RA | 14..382 | 17..385 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10623141..10623456 | 385..70 | 1580 | 100 | Minus |
| 3L | 28110227 | 3L | 10623508..10623563 | 72..17 | 280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:19:32 has no hits.
BO28195.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 11:44:18 Download gff for
BO28195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42521-RA | 14..382 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:25 Download gff for
BO28195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42521-RA | 14..382 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:00 Download gff for
BO28195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42521-RA | 14..382 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:00 Download gff for
BO28195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10623138..10623454 | 72..387 | 99 | <- | Minus |
| 3L | 10623509..10623563 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:25 Download gff for
BO28195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10616238..10616554 | 72..387 | 99 | <- | Minus |
| arm_3L | 10616609..10616663 | 17..71 | 100 | | Minus |
BO28195.pep Sequence
Translation from 16 to 403
> BO28195.pep
MRTVPILLLICCLGWLHKGQADERKIGAVGPPMKQRSLRHVSSFANPGQP
GRPGSGRPGRPGQGMPGRPGRPGGSGGAGGAGGSGGDGGAGGAGARPVRG
GYWRKGISLGQRRPEPRSKYYLYASFLDH
BO28195.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42521-PA | 123 | CG42521-PA | 1..123 | 1..123 | 681 | 100 | Plus |
| Mur82C-PB | 578 | CG12586-PB | 385..488 | 16..117 | 150 | 37.5 | Plus |
| lcs-PA | 145 | CG12794-PA | 29..92 | 47..101 | 148 | 51.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 329..410 | 46..106 | 146 | 43.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 329..410 | 46..106 | 146 | 43.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 395..485 | 47..118 | 144 | 41.8 | Plus |
