BO28211.complete Sequence
373 bp assembled on 2012-04-25
GenBank Submission: KX798350
> BO28211.complete
GAAGTTATCAGTCGACATGGATGCACGCAAGTTTTCTACCCACATATTGG
ATACTTCGGTGGGAAAGGCGGCAGCCAATGTGAGAGTAACAGTTTCCAGG
CTGGACGAGATTCAGGAATGGAGATCCCTTCGGGCGGCCCAAACTGATGC
GGATGGTCGCTGCCTGCTCTTGGAACCTGGTCAATTTCCCGGCGGGATCT
ATAAGCTGACCTTTCACGTGGGCGCCTATTACGCGGAGCGCAATGTGAGG
ACACTTTATCCAGCAATTGACTTGATTGTGGATTGCAGTGAGAATCAGAA
CTATCACATTCCTTTGTTACTCAATCCCTTTGGGTATTCCACATATCGTG
GAACAGCAAGCTTTCTAGACCAT
BO28211.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:28:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30016-RA | 342 | CG30016-PA | 1..339 | 17..355 | 1680 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:28:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30016-RA | 446 | CG30016-RA | 22..360 | 17..355 | 1680 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:28:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10874978..10875284 | 355..49 | 1535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:28:18 has no hits.
BO28211.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 18:28:38 Download gff for
BO28211.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30016-RA | 22..360 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:39 Download gff for
BO28211.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30016-RA | 22..360 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:57 Download gff for
BO28211.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30016-RA | 22..360 | 17..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:57 Download gff for
BO28211.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10874974..10875283 | 50..357 | 99 | <- | Minus |
2R | 10875339..10875371 | 17..49 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:39 Download gff for
BO28211.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6762479..6762788 | 50..357 | 99 | <- | Minus |
arm_2R | 6762844..6762876 | 17..49 | 96 | | Minus |
BO28211.pep Sequence
Translation from 16 to 373
> BO28211.pep
MDARKFSTHILDTSVGKAAANVRVTVSRLDEIQEWRSLRAAQTDADGRCL
LLEPGQFPGGIYKLTFHVGAYYAERNVRTLYPAIDLIVDCSENQNYHIPL
LLNPFGYSTYRGTASFLDH
BO28211.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30016-PA | 113 | CG30016-PA | 1..113 | 1..113 | 595 | 100 | Plus |