BO28213.complete Sequence
613 bp assembled on 2012-05-15
GenBank Submission: KX795778
> BO28213.complete
GAAGTTATCAGTCGACATGGAAGCACTACGTCGATTTTTAAGAACGGAGA
CTCGTTGTCGCCTCAACGGGATACATACCCTAATATTGTGTGTCCTATTT
TTGGGTTTTTCGGTGGCTGGTGAGATGCCGGATTTGTTCACTCCCGAACC
GGATCTCACGATAGACGAATGCCACGATGAGTTCACCATTGCCTGTGCCA
ACGCTTCACTGGTCTTCTCCGATTCCTACGATCTGTGCGAACTGAATGCC
AATGAGACCATCATCAATCTAGAGGTCGATGTTGAACTGGAGCGACTCCA
AATCGAGTTGGGATCCAGTGCGGTGTGCGGCAATATGCAAATCTGCGATA
CATTGGTTGACGATCTGGAGTACTTTCAGTGCATCAATAAGAACGGAATC
CATAACCTCGACATTCTGACCGAAATAAATTACAATGCCACAAGTGCTTA
CACACGACTTCACGAGGACTATGATGCAGTGCATCGGGCGCTTCTGCTTT
GCGGCCTCGATGCCCAAAAAAAGTACATGGAGGACATAAGACAGGCCCAC
AGAGAACTCACTAAATGTCGATCCGAAATCGACGAGCTTAACGAGGCAAG
CTTTCTAGACCAT
BO28213.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14495-RB | 474 | CG14495-PB | 1..471 | 125..595 | 2355 | 100 | Plus |
| CG14495-RA | 474 | CG14495-PA | 1..471 | 125..595 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:20:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14495-RB | 932 | CG14495-RB | 217..795 | 17..595 | 2895 | 100 | Plus |
| CG14495-RA | 838 | CG14495-RA | 20..598 | 17..595 | 2895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:20:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18049328..18049706 | 395..17 | 1895 | 100 | Minus |
| 2R | 25286936 | 2R | 18049044..18049244 | 595..395 | 1005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:20:32 has no hits.
BO28213.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:46:47 Download gff for
BO28213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14495-RA | 20..598 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:14 Download gff for
BO28213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14495-RA | 20..598 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:52 Download gff for
BO28213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14495-RA | 20..598 | 17..597 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:52 Download gff for
BO28213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18049042..18049244 | 395..597 | 99 | <- | Minus |
| 2R | 18049329..18049706 | 17..394 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:14 Download gff for
BO28213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13936547..13936749 | 395..597 | 99 | <- | Minus |
| arm_2R | 13936834..13937211 | 17..394 | 100 | | Minus |
BO28213.pep Sequence
Translation from 16 to 613
> BO28213.pep
MEALRRFLRTETRCRLNGIHTLILCVLFLGFSVAGEMPDLFTPEPDLTID
ECHDEFTIACANASLVFSDSYDLCELNANETIINLEVDVELERLQIELGS
SAVCGNMQICDTLVDDLEYFQCINKNGIHNLDILTEINYNATSAYTRLHE
DYDAVHRALLLCGLDAQKKYMEDIRQAHRELTKCRSEIDELNEASFLDH
BO28213.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14495-PB | 157 | CG14495-PB | 1..157 | 37..193 | 829 | 100 | Plus |
| CG14495-PA | 157 | CG14495-PA | 1..157 | 37..193 | 829 | 100 | Plus |
