BO28306.complete Sequence
367 bp assembled on 2011-06-27
GenBank Submission: KX799397
> BO28306.complete
GAAGTTATCAGTCGACATGGACATTAACCCAATAATCAGATCTATTCTCA
GCCGCTTCAGAGGCTGCACCATCAGAAGTTATCTGGTTGTTCTGCCCGAT
CAGAGTCGCATAGAAAATCAACTAAAACTGGAGGATCTGCAAACAGAACG
CGGAATCTTGGATCTGCAATCCCATGAGCTGGCACTCAAGCAAAAGCGCG
TCGAGGCCAATCTAACCGACCTGACCCGCTGCATCCGTGGCATGGAGTTC
GATGTGAAGGTGAATTCCAATCGCGAGAGGAAGGAGAGAAAATCTGATCG
ACGCCCCCCAGCTGATAAGAAATCACCCAAAGTCGGTGATTTCAGCGAAG
CAAGCTTTCTAGACCAT
BO28306.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10332-RA | 336 | CG10332-PA | 1..333 | 17..349 | 1650 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10332-RA | 739 | CG10332-RA | 41..374 | 16..349 | 1655 | 99.7 | Plus |
IM18-RA | 739 | CG33706-RA | 41..374 | 16..349 | 1655 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23601279..23601482 | 349..146 | 1020 | 100 | Minus |
2R | 25286936 | 2R | 23601550..23601622 | 146..74 | 350 | 98.6 | Minus |
2R | 25286936 | 2R | 23601674..23601733 | 75..16 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:10 has no hits.
BO28306.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:52 Download gff for
BO28306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 42..374 | 17..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:56 Download gff for
BO28306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 42..374 | 17..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:03 Download gff for
BO28306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM18-RA | 42..374 | 17..351 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:03 Download gff for
BO28306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23601275..23601482 | 146..351 | 99 | <- | Minus |
2R | 23601551..23601620 | 76..145 | 98 | <- | Minus |
2R | 23601674..23601732 | 17..75 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:56 Download gff for
BO28306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19488798..19489005 | 146..351 | 99 | <- | Minus |
arm_2R | 19489074..19489143 | 76..145 | 98 | <- | Minus |
arm_2R | 19489197..19489255 | 17..75 | 100 | | Minus |
BO28306.pep Sequence
Translation from 16 to 367
> BO28306.pep
MDINPIIRSILSRFRGCTIRSYLVVLPDQSRIENQLKLEDLQTERGILDL
QSHELALKQKRVEANLTDLTRCIRGMEFDVKVNSNRERKERKSDRRPPAD
KKSPKVGDFSEASFLDH
BO28306.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10332-PA | 111 | CG10332-PA | 1..111 | 1..111 | 561 | 100 | Plus |