Clone BO28307 Report

Search the DGRC for BO28307

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:283
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG7755-RA
Protein status:BO28307.pep: Imported from assembly
Sequenced Size:1168

Clone Sequence Records

BO28307.complete Sequence

1168 bp assembled on 2011-06-28

GenBank Submission: KX796272

> BO28307.complete
GAAGTTATCAGTCGACATGCTAAGATGCCCGAAAGTGACCCAGTCGATGC
TGGCCAGGATCAGCGTCCGCCACTTCGCAGACGAGATCCACGGCAGTGTG
CGAGCGGCCTACGCAAAAGGAGACGCTCGAGCTGATCCGGTCAATGTGCT
GCCCAAGTCCAAATACGGTGGAATCAATACGGTCTCTCTGGTCACGGGCA
CCACCATCATTGGCCAGCAGGGAGCCCAATTCGTGTCATCCCTGCTTTCG
AGCAGCCGCGTCCCTGTGGAGGTCCAAGTCATCGAAGCTGGCCAAGATGA
CGAGTACTTCCACTCGGTGCTCCGGAACAGAACCGCCGTTCATGTGGACA
ATCAGGCGGACGCGGAAGCCAAGCAGAAGGCGCTCAAGATCTGCAATGAT
CTGGACTTGTACGTCTTCAAGACCCGGACACGCAGCTTTCCCGGCTTCAA
GTGCCGCTTTCCGGGCGTGGACATCCAGTTAATCGGTCAGAACAACATGG
GTATCTTCAACGAACTGGAATATTCACCCGTGGAGGGAGTGGTGGAGGCC
CTGTCCGTCGTCTCCCAAAAAGGCAATGACAAGTATCTGCGGTACGCCTT
TAAGGCGGCTGCAAAGGCGGGCCGGAAACGGGTGACGCTGATCAACAAGG
CCAAGGAGTGGCCCATTAGCGATGGCTCACTGGTGGAAGCCGCCCAGCGC
TTGCACTGCCACTACAAGGATTGCCTGGAGCTGGAGCTCATGGAGGTGGA
GGAGGCCATCAGCCGGCTGATGACGGAGCCCACCTACTTCGATTGCCTCT
TCGCCAGCGAACGCTATGCCACGTTCCTATCCGCCATATGCAGTGGAGTC
TGTGGCGGGGCTAATCTCTTCAGTGCGGTGGAGATCGGAGATCACCATGC
CGTTTTCAAACCGCTCCAGACGAAACTATCGCTGACCAACTATGCCAATC
TAAGTGCCTACGGCATCGTGTCCACCATTGTGGATCTCTTCCAGCATCTG
GGCCATGATAAGTGCGCCGATGCTCTGTGGTGCGAATTGAAGCGCACCAT
GGACGAGGGCATTCGCACCAAGGAGTTCGGTGGCCAGGACACCGGCGAGT
ATGTCATTTGCAACATCATCAACCAGCTGCGATGCCGAGCATTGGGTAAA
GCAAGCTTTCTAGACCAT

BO28307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7755-RA 1137 CG7755-PA 1..1134 17..1150 5475 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG7755-RA 1317 CG7755-RA 86..1219 17..1150 5475 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16281728..16282861 1150..17 5475 98.9 Minus
Blast to na_te.dros performed on 2014-11-26 16:23:00 has no hits.

BO28307.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:49:57 Download gff for BO28307.complete
Subject Subject Range Query Range Percent Splice Strand
CG7755-RA 86..1219 17..1152 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:59:33 Download gff for BO28307.complete
Subject Subject Range Query Range Percent Splice Strand
CG7755-RA 86..1219 17..1152 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:45 Download gff for BO28307.complete
Subject Subject Range Query Range Percent Splice Strand
CG7755-RA 86..1219 17..1152 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:45 Download gff for BO28307.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16281726..16282861 17..1152 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:59:33 Download gff for BO28307.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12169231..12170366 17..1152 98   Minus

BO28307.pep Sequence

Translation from 16 to 1168

> BO28307.pep
MLRCPKVTQSMLARISVRHFADEIHGSVRAAYAKGDARADPVNVLPKSKY
GGINTVSLVTGTTIIGQQGAQFVSSLLSSSRVPVEVQVIEAGQDDEYFHS
VLRNRTAVHVDNQADAEAKQKALKICNDLDLYVFKTRTRSFPGFKCRFPG
VDIQLIGQNNMGIFNELEYSPVEGVVEALSVVSQKGNDKYLRYAFKAAAK
AGRKRVTLINKAKEWPISDGSLVEAAQRLHCHYKDCLELELMEVEEAISR
LMTEPTYFDCLFASERYATFLSAICSGVCGGANLFSAVEIGDHHAVFKPL
QTKLSLTNYANLSAYGIVSTIVDLFQHLGHDKCADALWCELKRTMDEGIR
TKEFGGQDTGEYVICNIINQLRCRALGKASFLDH

BO28307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:52:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7755-PA 378 CG7755-PA 1..378 1..378 1958 100 Plus
CG5028-PC 392 CG5028-PC 49..389 45..374 411 31.3 Plus
CG5028-PD 393 CG5028-PD 49..389 45..374 411 31.3 Plus
CG5028-PB 402 CG5028-PB 49..389 45..374 411 31.3 Plus
CG5028-PA 402 CG5028-PA 49..389 45..374 411 31.3 Plus