BO28310.complete Sequence
586 bp assembled on 2011-06-27
GenBank Submission: KX797067
> BO28310.complete
GAAGTTATCAGTCGACATGCGGAAGGTCCAAGTTTTGGTTCAGACGCGCG
ACGGCAAGAAGACCGTCTACGAGGTGGATCGCTTAGGAACGGTGGCCAGC
CTGAAGGCACGGATCGGGCAGGTCATGTCCGTGCCCATGGGCTTCAGTCG
GCTGTCGTACAAGGGTCGCGTGCTATCCAATCAGAGCGTACTGGAGGATT
TGGGGCCCAATAAGTCCACCCTGGATCTCACCTGGAAGCCGGTCGTCCTG
ACGGCCAATCAGAGCAGCAAGTTAAGCAAGTTCGGCTATGGCAGGATAGA
CGATAGTGAAGTTATGTTTACACTGATCGGTGGCTATCAGCAACGCGAAG
AATATCCTGGTGGCCTAGTCAATCCACCGGACGACGAAAGTCAACTAAAC
TTCAACGCAGGTGACGATGATGATGCACTGGAGGCCCAGGACATGACTGG
ACACGATTTGTCCTCAATTCAAACCGATGATTTATCGCTCAAAGGCCAGA
CGGAACCGGAGCTGGATTGCTCCATTGGATCTCATGGATTCTCTGGATCT
CAAGAAGAAGGCCACGAAGCAAGCTTTCTAGACCAT
BO28310.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32713-RB | 555 | CG32713-PB | 1..552 | 17..568 | 2745 | 99.8 | Plus |
| CG32713-RA | 555 | CG32713-PA | 1..552 | 17..568 | 2745 | 99.8 | Plus |
| CG33223-RB | 555 | CG33223-PB | 1..552 | 17..568 | 2610 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32713-RB | 796 | CG32713-RB | 73..624 | 17..568 | 2745 | 99.8 | Plus |
| CG32713-RA | 704 | CG32713-RA | 73..624 | 17..568 | 2745 | 99.8 | Plus |
| CG33223-RB | 689 | CG33223-RB | 67..618 | 17..568 | 2610 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8457009..8457560 | 568..17 | 2745 | 99.8 | Minus |
| X | 23542271 | X | 8465761..8466312 | 568..17 | 2610 | 98.2 | Minus |
| X | 23542271 | X | 13402476..13402714 | 258..17 | 785 | 89.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:38 has no hits.
BO28310.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:54 Download gff for
BO28310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32713-RA | 73..624 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:05 Download gff for
BO28310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32713-RA | 73..624 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:11 Download gff for
BO28310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32713-RA | 73..624 | 17..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:11 Download gff for
BO28310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8457007..8457560 | 17..570 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:05 Download gff for
BO28310.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8351040..8351593 | 17..570 | 99 | | Minus |
BO28310.pep Sequence
Translation from 16 to 586
> BO28310.pep
MRKVQVLVQTRDGKKTVYEVDRLGTVASLKARIGQVMSVPMGFSRLSYKG
RVLSNQSVLEDLGPNKSTLDLTWKPVVLTANQSSKLSKFGYGRIDDSEVM
FTLIGGYQQREEYPGGLVNPPDDESQLNFNAGDDDDALEAQDMTGHDLSS
IQTDDLSLKGQTEPELDCSIGSHGFSGSQEEGHEASFLDH
BO28310.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32713-PB | 184 | CG32713-PB | 1..184 | 1..184 | 947 | 100 | Plus |
| CG32713-PA | 184 | CG32713-PA | 1..184 | 1..184 | 947 | 100 | Plus |
| CG33223-PB | 184 | CG33223-PB | 1..184 | 1..184 | 923 | 97.3 | Plus |
| CG33223-PA | 184 | CG33223-PA | 1..184 | 1..184 | 923 | 97.3 | Plus |
| CG12725-PA | 163 | CG12725-PA | 1..162 | 1..178 | 461 | 60.3 | Plus |
