BO28311.complete Sequence
670 bp assembled on 2011-07-05
GenBank Submission: KX799188
> BO28311.complete
GAAGTTATCAGTCGACATGATTCGCGCCATGGTAATGACCAAATGGAGTA
AGTCGGTGGCGGGACCACTGGTCACGGCGTGGAACTACTCCACATTGAAT
CGGCTCAATGGCAATACTGTGCGCCCGCGTGCTCTGTTCCTGAATCTCGA
CCGCAAGTTCTCCGCCGAAGGTGGCGGCGATGAGAAGCCCAAGAATGTGC
CTCCCGGCTTTGCGGCTCCAGGGTTTCCATCCACCTTGGGCAATAACCCA
GAGAACACTACGCGTAAGGATGTGCCCATTGGCGAGGTGCAGGCGCCAAC
TATTTCCGTAGTGAACGCAGGTGGTAAACTGGGCAGAGCCGAGCCACTGG
AGGCCAGCACCATCGTGCGCAGCAAGGGCACTTCGAACGAGGACAAGATG
ACCGAGGCGCAGAAGAAGGCATCGGAGGCCAAGGAGGCGGCCGCCAAGCA
GTTGCAGGATGTCATGGCCAACTTGCCCAGCAAGGAGCAGACCGAAAAGT
ATTTCTTTCGCGTGGTTGCCTTCTTCTATGACTTGACCTACCTAACCGCC
ACCTGGTTGCTCAACTTTGTCGAGCACAATATCGTTCAAAATGCCAAGGT
GCAGCACTACTGGAAGCGATTCCACGAAAAAATGGAGCAGGCCAAGAAGG
ATGCAAGCTTTCTAGACCAT
BO28311.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:46:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10063-RA | 639 | CG10063-PA | 1..636 | 17..652 | 3030 | 98.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10063-RA | 827 | CG10063-RA | 110..745 | 17..652 | 3030 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6971661..6972229 | 652..84 | 2710 | 98.4 | Minus |
3L | 28110227 | 3L | 6972292..6972358 | 83..17 | 320 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:46:03 has no hits.
BO28311.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-05 16:54:34 Download gff for
BO28311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10063-RA | 64..699 | 17..654 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:16 Download gff for
BO28311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10063-RA | 110..745 | 17..654 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:02 Download gff for
BO28311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10063-RA | 110..745 | 17..654 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:02 Download gff for
BO28311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6971659..6972229 | 84..654 | 98 | <- | Minus |
3L | 6972292..6972358 | 17..83 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:16 Download gff for
BO28311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6964759..6965329 | 84..654 | 98 | <- | Minus |
arm_3L | 6965392..6965458 | 17..83 | 98 | | Minus |
BO28311.pep Sequence
Translation from 16 to 670
> BO28311.pep
MIRAMVMTKWSKSVAGPLVTAWNYSTLNRLNGNTVRPRALFLNLDRKFSA
EGGGDEKPKNVPPGFAAPGFPSTLGNNPENTTRKDVPIGEVQAPTISVVN
AGGKLGRAEPLEASTIVRSKGTSNEDKMTEAQKKASEAKEAAAKQLQDVM
ANLPSKEQTEKYFFRVVAFFYDLTYLTATWLLNFVEHNIVQNAKVQHYWK
RFHEKMEQAKKDASFLDH
BO28311.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:55:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10063-PA | 212 | CG10063-PA | 1..212 | 1..212 | 1103 | 100 | Plus |