BO28315.complete Sequence
610 bp assembled on 2011-06-27
GenBank Submission: KX797414
> BO28315.complete
GAAGTTATCAGTCGACATGATGTCCAGGAAAGGCAATCAACTCCACCCGT
CATCAATCCGTCCATCATCGACCACACCGGACTGCAATCAGAAGCGGCGA
GGCGACATGACAGCTCCTCCTCCGAACCCAAAGCCAGAGAAAAGCCGCAT
CATGGAGATGCATGCGATTTTTCTGGGGCACGACACTCGCGGCGACAATA
AGATATCCATCCGGCACCTGGGCCATTGTCTGCGTGCGATGGGCGCCACT
CCCACGGAGGCGATGGTCAGCAAACATGTCCGCCAGTACGAGGCCTCCAC
CATGCAGCGCATATGCTTCGATGAGGTCATGGGCATCTACTCCAGTCTTG
GCAAGCACGGCGGCATGTTGTCTCCCAAGAAAAAACAGATCGAGGCGGAC
CAGTTCGTATCCAGTCTAAGGGTCTTTGATACGGATAAGTCCGGTTGGAT
TCCCGCCATCAGACTCCGGCGCATTCTAACCAAGACCGGGGAGTGCATGG
GCAGCATGGAAGTGGACGAGCTGCTCCAGGGTAGGATCAACAAAGACGGC
TTGGTCGACTACAAGAAGCTGGTTCAAGACATTATCTATGGGGCAAGCTT
TCTAGACCAT
BO28315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17237-RA | 579 | CG17237-PA | 1..576 | 17..592 | 2865 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17237-RA | 914 | CG17237-RA | 210..785 | 17..592 | 2865 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2288632..2289207 | 592..17 | 2865 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:49:04 has no hits.
BO28315.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:55 Download gff for
BO28315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17237-RA | 164..739 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:18 Download gff for
BO28315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17237-RA | 210..785 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:22 Download gff for
BO28315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17237-RA | 210..785 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:22 Download gff for
BO28315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2288630..2289207 | 17..594 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:18 Download gff for
BO28315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2288630..2289207 | 17..594 | 99 | | Minus |
BO28315.pep Sequence
Translation from 16 to 610
> BO28315.pep
MMSRKGNQLHPSSIRPSSTTPDCNQKRRGDMTAPPPNPKPEKSRIMEMHA
IFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRIC
FDEVMGIYSSLGKHGGMLSPKKKQIEADQFVSSLRVFDTDKSGWIPAIRL
RRILTKTGECMGSMEVDELLQGRINKDGLVDYKKLVQDIIYGASFLDH
BO28315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17237-PA | 192 | CG17237-PA | 1..192 | 1..192 | 1011 | 100 | Plus |
| Mlc-c-PA | 147 | CG3201-PA | 6..147 | 42..192 | 220 | 33.8 | Plus |
| Mlc-c-PB | 153 | CG3201-PB | 17..153 | 47..192 | 217 | 34.9 | Plus |
| Cam-PD | 149 | CG8472-PD | 7..143 | 42..186 | 172 | 30.6 | Plus |
| Cam-PC | 149 | CG8472-PC | 7..143 | 42..186 | 172 | 30.6 | Plus |
