BO28317.complete Sequence
718 bp assembled on 2011-06-27
GenBank Submission: KX793991
> BO28317.complete
GAAGTTATCAGTCGACATGGAGTACAAGATGATTGCACCAGAGCACAGTG
AACAGGTGATGGAGCATCTGCGGCGCAACTTCTTTGCCGACGAGCCGCTA
AACAAGGCCGCCGGCTTGTGCCAGAACGGCAGCAGTTGCCCCGCCCTGGA
GGCGCACTGTGCCGAGGCCATACAGCACCGGATGAGCGTGATGGCTGTGG
ACGCAAAGGAGAAGGATACCTTGAAAATAGTCGGCGTCGTCCTCAATGGC
ATCCTGAAGCCGGGCGACACGGCCAAGGCGCTGAGCAAGCTGGACTGCAA
CGACGATGCAGATTTCCGCAAGATTTTCGACTTGCTGCACAGGCACAATC
TCAAGCACAATCTCTTCGAGCACTTCGACGTGGACTGCATGTTCGATGTG
CGCATCCTATCGGTGGACTCGTGCTACCGTGGCCAGGGGATTGCGAATGA
GCTGGTCAAGCGGTCCGTGGCGGTGGCCAAAAAGAATGGCTTTCGCCTGC
TGAAGGCCGATGCCACCGGCATCTTCTCGCAGAAGATCTTTCGTTCCCAT
GGCTTTGAGGTCTTCTCGGAGCAACCCTACAGCAAGTATACGGATGAGAA
TGGCAAGGTGATCTTGCCCGTGGAGGCGCCCCACATCAAATTGCAGCAGC
TCTACAAGGCGATCTGTGCGGATGACCAGGATGAGAAGAAGCAGTCGCTT
GCAAGCTTTCTAGACCAT
BO28317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13759-RD | 687 | CG13759-PD | 1..684 | 17..700 | 3390 | 99.7 | Plus |
| CG13759-RC | 687 | CG13759-PC | 1..684 | 17..700 | 3390 | 99.7 | Plus |
| CG13759-RB | 687 | CG13759-PB | 1..684 | 17..700 | 3390 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13759-RD | 934 | CG13759-RD | 150..834 | 16..700 | 3395 | 99.7 | Plus |
| CG13759-RC | 938 | CG13759-RC | 154..838 | 16..700 | 3395 | 99.7 | Plus |
| CG13759-RB | 990 | CG13759-RB | 206..890 | 16..700 | 3395 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2583039..2583723 | 16..700 | 3395 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:49:14 has no hits.
BO28317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:56 Download gff for
BO28317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13759-RC | 155..838 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:21 Download gff for
BO28317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13759-RB | 133..816 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:26 Download gff for
BO28317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13759-RB | 207..890 | 17..702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:26 Download gff for
BO28317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2583040..2583723 | 17..702 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:21 Download gff for
BO28317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2477073..2477756 | 17..702 | 99 | | Plus |
BO28317.pep Sequence
Translation from 16 to 718
> BO28317.pep
MEYKMIAPEHSEQVMEHLRRNFFADEPLNKAAGLCQNGSSCPALEAHCAE
AIQHRMSVMAVDAKEKDTLKIVGVVLNGILKPGDTAKALSKLDCNDDADF
RKIFDLLHRHNLKHNLFEHFDVDCMFDVRILSVDSCYRGQGIANELVKRS
VAVAKKNGFRLLKADATGIFSQKIFRSHGFEVFSEQPYSKYTDENGKVIL
PVEAPHIKLQQLYKAICADDQDEKKQSLASFLDH
BO28317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13759-PD | 228 | CG13759-PD | 1..228 | 1..228 | 1191 | 100 | Plus |
| CG13759-PC | 228 | CG13759-PC | 1..228 | 1..228 | 1191 | 100 | Plus |
| CG13759-PB | 228 | CG13759-PB | 1..228 | 1..228 | 1191 | 100 | Plus |
| CG13759-PA | 228 | CG13759-PA | 1..228 | 1..228 | 1191 | 100 | Plus |
| Dat-PA | 240 | CG3318-PA | 25..230 | 4..216 | 234 | 29.5 | Plus |
