BO28319.complete Sequence
766 bp assembled on 2011-06-27
> BO28319.complete
GAAGTTATCAGTCGACATGGCCAGTCTTGATGAGTTCTTTGCCAAGAAAG
ATAATAAGAAAACTAAAAAAAAAAAACCCAATTACTTGGCCACCGATGAG
TTATACAAAACGCTGGAGGAATCTGCAAAGTTGGCCACGGATGCCGATTC
CGTAAAGAGTATGGAAAATGAGAATCGTACAGAGGGGCCAACTGAATCTA
CAGGATCGGCTATGAAATCGTTGGAATTTTCACTTCTTTACCCAAATGAA
TCTGTTAAAGAGGAGGATGAATGGTCTGAATTTACAGAGGAGAATCGTAT
GGAGCTCATGAGCTTGGGCCACAGCTCTGGCTCAACAATACTGACTCAAT
TGGCCGTCGGCGATGTCAAAGCTCAAGATTCGGAGCAAACCGATACAGGT
GGCGATGGCATGAACGTGGGTCAGAAACATGATGATGACATCGGCAATAC
CACTTGTCCCTGGGTAAAAATGGAGCACGCACTGGAGCAGCAGAAGCTAA
AGGAGCCGATGTCTGTGGAGCAACCGAATAAGAAAGAACCGTCCGAGGTA
AAGAGCCAAATCTACATACCACCTGCTCTTCGCCAGAGCCAAGGTGACTT
CAATCGACGGGATCAGGCTGAGAGCCGTCTGCGTAAGGTTCCATCCAAGA
TGTCCGGAAAACCTCAAGCTCCTGATCTCAACAGTGACGAGTATTTCCCC
AGTCTTAGCAAAGCACTCAAACGCACCAAGGCAAGCTTTCTAGACCATTC
GTTGGGCGCCCTAAGG
BO28319.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4892-RA | 573 | CG4892-PA | 1..570 | 161..730 | 2820 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4892-RA | 905 | CG4892-RA | 66..778 | 17..730 | 3460 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16133573..16134285 | 17..730 | 3460 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:49:34 has no hits.
BO28319.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:57 Download gff for
BO28319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4892-RA | 66..782 | 17..736 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:30 Download gff for
BO28319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4892-RA | 66..782 | 17..736 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:34 Download gff for
BO28319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4892-RA | 66..782 | 17..736 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:34 Download gff for
BO28319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16133573..16134289 | 17..735 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:30 Download gff for
BO28319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16133573..16134289 | 17..735 | 98 | <- | Plus |
BO28319.pep Sequence
Translation from 16 to 766
> BO28319.pep
MASLDEFFAKKDNKKTKKKKPNYLATDELYKTLEESAKLATDADSVKSME
NENRTEGPTESTGSAMKSLEFSLLYPNESVKEEDEWSEFTEENRMELMSL
GHSSGSTILTQLAVGDVKAQDSEQTDTGGDGMNVGQKHDDDIGNTTCPWV
KMEHALEQQKLKEPMSVEQPNKKEPSEVKSQIYIPPALRQSQGDFNRRDQ
AESRLRKVPSKMSGKPQAPDLNSDEYFPSLSKALKRTKASFLDHSLGALR
BO28319.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4892-PA | 190 | CG4892-PA | 1..190 | 49..238 | 987 | 100 | Plus |
| CG3760-PC | 265 | CG3760-PC | 1..217 | 1..233 | 215 | 31 | Plus |
| CG3760-PB | 265 | CG3760-PB | 1..217 | 1..233 | 215 | 31 | Plus |
| CG3760-PA | 271 | CG3760-PA | 1..223 | 1..233 | 212 | 30.8 | Plus |
| CG3760-PD | 264 | CG3760-PD | 1..216 | 1..233 | 209 | 30.6 | Plus |
