BO28320.complete Sequence
592 bp assembled on 2011-06-27
GenBank Submission: KX794040
> BO28320.complete
GAAGTTATCAGTCGACATGGCTGAAGTCCTAGAGGAATTCATCACCCTAA
CGCCCTTGACTTGTGTGCAACAATGCAATGCTTTACTAGGCTCAACATCA
GGAAAGCCGAGAAGCTGCTCCGTATTTTTTACACTATTTGGCGTATACTG
CGGCGTTCTCATCTTTCGGGCGTATCGCACATATTCCTCTAAGCAAGAAA
GAGACGAGGAAAAGATAACCGAAGGAGTTACCCTTGAGGCTAAGGAGGAA
GATTTGATCATAGGACCTGGTTCCAGTCTTGTGAACGAATATGTAGAACA
AACGAAGCCGATTCTGTTGCAACCCGTCGGTTTTTCCAGTACTGACATGA
GATGGCGCTATTGCAACCACTTGCCGGAAGCAGAATTAGCACAAGGCTCT
GATAGTGAAAACAGATCAACCGAAAGAGATGACATTGATAACCTCGAAAG
GATGAGCAATGTTGTGGATGATAATGATGCGCAGAAGCCAGTTGCATCCA
CATCGATGGCAACGGCTCGGGCGCCTGAGGATAACGCCGATGGTGAGCAC
GTCGAGCCCACACCATTTTCGGTGGCAAGCTTTCTAGACCAT
BO28320.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30355-RA | 561 | CG30355-PA | 1..558 | 17..574 | 2760 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30355-RA | 751 | CG30355-RA | 121..683 | 12..574 | 2770 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8679494..8679833 | 351..12 | 1685 | 99.7 | Minus |
2R | 25286936 | 2R | 8679214..8679438 | 574..350 | 1095 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:49:39 has no hits.
BO28320.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:57 Download gff for
BO28320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30355-RA | 121..678 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:32 Download gff for
BO28320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30355-RA | 126..683 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:36 Download gff for
BO28320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30355-RA | 126..683 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:36 Download gff for
BO28320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8679211..8679436 | 352..576 | 98 | <- | Minus |
2R | 8679494..8679828 | 17..351 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:32 Download gff for
BO28320.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4566716..4566941 | 352..576 | 98 | <- | Minus |
arm_2R | 4566999..4567333 | 17..351 | 100 | | Minus |
BO28320.pep Sequence
Translation from 16 to 592
> BO28320.pep
MAEVLEEFITLTPLTCVQQCNALLGSTSGKPRSCSVFFTLFGVYCGVLIF
RAYRTYSSKQERDEEKITEGVTLEAKEEDLIIGPGSSLVNEYVEQTKPIL
LQPVGFSSTDMRWRYCNHLPEAELAQGSDSENRSTERDDIDNLERMSNVV
DDNDAQKPVASTSMATARAPEDNADGEHVEPTPFSVASFLDH
BO28320.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30355-PA | 186 | CG30355-PA | 1..186 | 1..186 | 964 | 100 | Plus |