BO28321.complete Sequence
937 bp assembled on 2011-06-27
GenBank Submission: KX794795
> BO28321.complete
GAAGTTATCAGTCGACATGGATAATCATATGGATAAGAACGATGAGGACA
AGAGGTCGTCATCCCCGGATTCTCAACGTCAAGTTATAATATATATGCCA
CCCGCCGTTGAACATGGTCATGTTGTGTATCTAAAAGATGCGAATTTAGG
CGCCACAGAGACGGAGGCTTCTGCACAACTCGACCCACAGGAGCATCTTT
CGAATGCGGATCGGTTGGAGAACAATCGGGTGATTTCAGAGCTGGATGAT
GAGCCGAGCACGAGTGCTCAGTCCGCAGTTAAGGGTCAGAAATCAGAAGA
TGATCAGGGTCACCAGACCAAGACAGGTATTTCAAAAATGCCAGGATCTC
CTAAGCAGTTGCACAATGTATTGGAAGTAATCTGTCGCTTCTCACGCGAG
ATTCCTGATGCAATGGAGGGCCGGGAGCAACTCCAGCCGGCAGTGATTGT
CCAAATTCCAAAATATCGCGAACTGGGAACCCAGACCGCTGAGTTGCCAT
CGCAGTCGCAGCGATTGCGTTTGGATCTGACCGACCTGAGACCAGATCCG
AATCCACCGCCCTGCGAACGCACGCTGCACACATTCACGATTAGTGGCAA
CAATCTGCCGGGCAATCCTCGCCAGCTTCGTCAAACGATCTGCGCGCGAA
TTGGACGCTCCATCTGTGATTTTGTGGCAGCCTTTTGTCTTTGTCTGCAA
GTGAACAAGGATTGTGTCTTCTGTCTGGGTTTTTTTGTGGCCTTTGTGAT
CAGTGCCAGCTTCCTGACTGCCTTCTTCTACCGCACTCTTACCTTCTCCT
CGTCGCCGGTGCGAGTGGTGGCCAATCCGGTGAGCGGCACCATGCGCTAT
GAACTTGCCACACTGCGATTCAACGGAGGGTACTACTACATCTATAATAG
CAGCCAACAAAAGCTTCTCGCAAGCTTTCTAGACCAT
BO28321.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-RB | 906 | CG16853-PB | 1..903 | 17..919 | 4515 | 100 | Plus |
| CG16853-RA | 906 | CG16853-PA | 1..903 | 17..919 | 4515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-RB | 1053 | CG16853-RB | 72..974 | 17..919 | 4515 | 100 | Plus |
| CG16853-RA | 1293 | CG16853-RA | 385..1287 | 17..919 | 4515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13542652..13543554 | 17..919 | 4515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:50:00 has no hits.
BO28321.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:58 Download gff for
BO28321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 385..1287 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:41 Download gff for
BO28321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 385..1287 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:44 Download gff for
BO28321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 385..1287 | 17..921 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:44 Download gff for
BO28321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13542652..13543554 | 17..921 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:41 Download gff for
BO28321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13542652..13543554 | 17..921 | 99 | | Plus |
BO28321.pep Sequence
Translation from 16 to 937
> BO28321.pep
MDNHMDKNDEDKRSSSPDSQRQVIIYMPPAVEHGHVVYLKDANLGATETE
ASAQLDPQEHLSNADRLENNRVISELDDEPSTSAQSAVKGQKSEDDQGHQ
TKTGISKMPGSPKQLHNVLEVICRFSREIPDAMEGREQLQPAVIVQIPKY
RELGTQTAELPSQSQRLRLDLTDLRPDPNPPPCERTLHTFTISGNNLPGN
PRQLRQTICARIGRSICDFVAAFCLCLQVNKDCVFCLGFFVAFVISASFL
TAFFYRTLTFSSSPVRVVANPVSGTMRYELATLRFNGGYYYIYNSSQQKL
LASFLDH
BO28321.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-PB | 301 | CG16853-PB | 1..301 | 1..301 | 1572 | 100 | Plus |
| CG16853-PA | 301 | CG16853-PA | 1..301 | 1..301 | 1572 | 100 | Plus |
