BO28326.complete Sequence
1198 bp assembled on 2011-06-27
GenBank Submission: KX795440
> BO28326.complete
GAAGTTATCAGTCGACATGGCCGAGCTTCTGTCCCGCGAGAAGGAGCTCT
TTAAGATAAACCAGGAGCTGAATCTCCTGACCCTCAGTCCAGCTGCCGAC
GCCATGTATCCGGCAAAGGGGTCATCCAAATCCACTGCGGTGGCGGTGCC
GCGCTTCGCCACCTTCCAGAAACAAAAGGGGCCGAGCAGCCTGCTCCGGA
AAAAGGGTGCTCCCACGGCGTGCACGAAGGCAGCCCCGAAAGCTTCGCCA
GGCAGAGAGACGGTGCCCACAGCCCGTTCGCCGATGCCCGATATGAGTCT
GCTGACCAAGTCCAAGCCCGCTGCCGGACCCACCTCGCCCACCCCCCGCA
ATCTTTCCAAATTTAGTACCTTCACGAAGGATGTGAGCAGCAAGACGGCT
ACGTATGTCAAGTACCGGAACCCAAACTTTAGCGAGAGTCCTTCGTTGGA
CGAACTGCTGCGTAACGACGCCGATGAGGCAAACCGAAAACCAGATGTGG
TCGAAGTGGAGGTCACACAGAAGCGAGAGAGCACAACCGTCGTCAATGGC
CAGCTGAAGAAGCAGGTCACCAAGGACAACTTTATTAAATTCCTCAAGGC
CAAGGTGGCCATTCTGGAAGAGGATCACGCTCAACACGCCGGAGAGTTGA
TCCGACAGAAGGAGCAGCTTGAGCACGCCTTGGAAGCGCAACGCAAGTCA
GAGCACCAGCGCGACCAGGCGATCAACTCCAACAAGCACCTCTCCGAGCA
ACTGATGCGGTCCGAACGGCAGTGCGAGGGTTTCAACCAGCGCCAGAAGG
AGCAGCAGCTCGAGTTCATCACCCAGCAGCGGGAGCTGGAGGTGCTGAAG
CGGGATGCCAAGGTTTCCAGGCAGACGAACATAAACCTGGAGAACCGACT
GTCCCGCGTCCAGGAGGATGCAGACGCTGCCCGCCAGGAACTCAAGCTGC
TGCGCGAGGAGCAGCGCGACCAGTTGGAGGCGCATCGGAAGGAACTAAAG
CTGCGGGACAGCCGGATCCGGGCTCTTAAACGCCAGCGCGGCGACCTGCT
CAACGCGTACAAGAAGCAGCTCTACATGATCGACAACCTGAAGCGCCAGA
CCATCTGTTTGGAGCAGTCGGCAGCCATCGGATTCGGCGAGAAGGAGTTC
AACAAGGTGCTCGACTGGAATGCCAAGACGGCAAGCTTTCTAGACCAT
BO28326.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4681-RA | 1167 | CG4681-PA | 1..1164 | 17..1180 | 5805 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4681-RA | 1497 | CG4681-RA | 230..1393 | 17..1180 | 5805 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24578351..24578946 | 1180..585 | 2965 | 99.8 | Minus |
2R | 25286936 | 2R | 24579027..24579598 | 588..17 | 2845 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:50:37 has no hits.
BO28326.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:00 Download gff for
BO28326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4681-RA | 184..1347 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:57 Download gff for
BO28326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4681-RA | 230..1393 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:57 Download gff for
BO28326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4681-RA | 230..1393 | 17..1182 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:57 Download gff for
BO28326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24578348..24578942 | 589..1182 | 99 | <- | Minus |
2R | 24579027..24579598 | 17..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:57 Download gff for
BO28326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20465871..20466465 | 589..1182 | 99 | <- | Minus |
arm_2R | 20466550..20467121 | 17..588 | 99 | | Minus |
BO28326.pep Sequence
Translation from 16 to 1198
> BO28326.pep
MAELLSREKELFKINQELNLLTLSPAADAMYPAKGSSKSTAVAVPRFATF
QKQKGPSSLLRKKGAPTACTKAAPKASPGRETVPTARSPMPDMSLLTKSK
PAAGPTSPTPRNLSKFSTFTKDVSSKTATYVKYRNPNFSESPSLDELLRN
DADEANRKPDVVEVEVTQKRESTTVVNGQLKKQVTKDNFIKFLKAKVAIL
EEDHAQHAGELIRQKEQLEHALEAQRKSEHQRDQAINSNKHLSEQLMRSE
RQCEGFNQRQKEQQLEFITQQRELEVLKRDAKVSRQTNINLENRLSRVQE
DADAARQELKLLREEQRDQLEAHRKELKLRDSRIRALKRQRGDLLNAYKK
QLYMIDNLKRQTICLEQSAAIGFGEKEFNKVLDWNAKTASFLDH
BO28326.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4681-PA | 388 | CG4681-PA | 1..388 | 1..388 | 1947 | 100 | Plus |