BO28330.complete Sequence
727 bp assembled on 2011-06-27
GenBank Submission: KX797029
> BO28330.complete
GAAGTTATCAGTCGACATGGTCAGCGCAAAAACTATTATAGCTACTGGTG
TGCTGAACATCCTGGGCATTTCCTTTTTCGTGGCCCAGCCAAAGGATCGA
TGCTCGGCAGCTCCACCCGTTGGAAAGTATATCTTCCTACTAGCTATTCT
TCTGCTCTTTTGGGATTCAGACATGATTCCAAGGAAATTGAAACCGTTTT
CCCCACGGATTTTTGCCTGCGGAGATCTTTTATTCACGATCTTCTTCACC
GAAATAATCCTGCTGGTCGGATGGTGTGGCCTCGAGAGGATGACCTATCG
ATTTATATTTTCTGTGTGCCGTGGAAAACCTGGTTGCAATTACGGATTAA
TGACTTTCTGCAGCATCTTAGGTGCCGTTGGATCACTATGCATTGTGCTC
GAGGTGTTGACACAGCGGAAGATGAAGAATTTGGTGGGACAGAACAGTGC
CGGCTTGCTTATTCCTCAGGACGCCGGACCAGTGTTCAAATTCATTCATG
ATGTGCGAACCTTTGTGAGGGGCGCCATATACTTTTTCCAATTGACTCGG
GAGGAACGTATTCTATCAGTCCACGCCTTCGAGGCTCAATTGCGCTACAA
GAAGGGACAGGACGTACAACCTGGTGAACCTGCTGTCCAGGATTCCGGGA
ATCAAATGGACGCCGGTAAATCGACGACAGAACCGGAAATCGTCCACGAG
TTGTCCCCGGCAAGCTTTCTAGACCAT
BO28330.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12439-RB | 696 | CG12439-PB | 1..693 | 17..709 | 3405 | 99.4 | Plus |
| CG12439-RA | 696 | CG12439-PA | 1..693 | 17..709 | 3405 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12439-RB | 868 | CG12439-RB | 122..814 | 17..709 | 3405 | 99.4 | Plus |
| CG12439-RA | 799 | CG12439-RA | 53..745 | 17..709 | 3405 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9077242..9077934 | 17..709 | 3405 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:50:53 has no hits.
BO28330.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:01 Download gff for
BO28330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12439-RA | 53..745 | 17..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:00 Download gff for
BO28330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12439-RA | 53..745 | 17..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:00 Download gff for
BO28330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12439-RA | 53..745 | 17..711 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:00 Download gff for
BO28330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9077242..9077934 | 17..711 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:00 Download gff for
BO28330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9077242..9077934 | 17..711 | 99 | | Plus |
BO28330.pep Sequence
Translation from 16 to 727
> BO28330.pep
MVSAKTIIATGVLNILGISFFVAQPKDRCSAAPPVGKYIFLLAILLLFWD
SDMIPRKLKPFSPRIFACGDLLFTIFFTEIILLVGWCGLERMTYRFIFSV
CRGKPGCNYGLMTFCSILGAVGSLCIVLEVLTQRKMKNLVGQNSAGLLIP
QDAGPVFKFIHDVRTFVRGAIYFFQLTREERILSVHAFEAQLRYKKGQDV
QPGEPAVQDSGNQMDAGKSTTEPEIVHELSPASFLDH
BO28330.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12439-PB | 231 | CG12439-PB | 1..231 | 1..231 | 1202 | 100 | Plus |
| CG12439-PA | 231 | CG12439-PA | 1..231 | 1..231 | 1202 | 100 | Plus |
| CG34181-PA | 203 | CG34181-PA | 3..95 | 7..100 | 152 | 35.1 | Plus |
