BO28332.complete Sequence
517 bp assembled on 2011-06-27
GenBank Submission: KX794193
> BO28332.complete
GAAGTTATCAGTCGACATGTCGGCACGCAAGGAGAAACGAGACATACATT
ACTGGCGAAAACAGGCAGCCACCTTGCCGGATTTTGTGCCGCCGTGGAAG
CGGGAACAGGATTTGCAGCAGCTGCAACATCGAGCCTCGATCCTGTGGTC
GCCGCAACTGCAGGACCAAGATGACAAGGCTGTTCGCGAATACCTTGACT
ATGCGGCCAGTCTCTATGATATCGAGGAGGAGCAGGCGCTGTTCATCCTG
CGGCGTCACGGATACGACCTGCCCCTGGCACATCGACGTCTGGAGAAGAC
TGAGACAGCTCGAGGATGTCGCTACCATCGCTGGAAGGCCGAGGATCTCA
TCCGTCTTACCAAGGCCTTCGAGCAATACGGCACCGACTTCGCAAAGGTA
CGAAAGGAGCTACCCCACTTTCCCCTGGCCGAGCTTCGGCTGTACTTCTC
CTTCATGTCCTCGGCGTTGGAGACAGATGACCAACAGGCCATCCATAGAG
CAAGCTTTCTAGACCAT
BO28332.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:51:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31875-RD | 486 | CG31875-PD | 1..483 | 17..499 | 2385 | 99.6 | Plus |
CG31875-RC | 486 | CG31875-PC | 1..483 | 17..499 | 2385 | 99.6 | Plus |
CG31875-RB | 486 | CG31875-PB | 1..483 | 17..499 | 2385 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31875-RB | 1179 | CG31875-RB | 244..731 | 12..499 | 2395 | 99.4 | Plus |
CG31875-RD | 1241 | CG31875-RD | 311..793 | 17..499 | 2385 | 99.6 | Plus |
CG31875-RC | 1363 | CG31875-RC | 433..915 | 17..499 | 2385 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9996009..9996491 | 499..17 | 2385 | 99.6 | Minus |
Blast to na_te.dros performed 2014-11-26 15:51:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 854..962 | 299..405 | 108 | 60.7 | Plus |
BO28332.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:03 Download gff for
BO28332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31875-RB | 146..628 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:06 Download gff for
BO28332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31875-RB | 249..731 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:04 Download gff for
BO28332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31875-RB | 249..731 | 17..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:04 Download gff for
BO28332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9996006..9996491 | 17..501 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:06 Download gff for
BO28332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9996006..9996491 | 17..501 | 99 | | Minus |
BO28332.pep Sequence
Translation from 16 to 517
> BO28332.pep
MSARKEKRDIHYWRKQAATLPDFVPPWKREQDLQQLQHRASILWSPQLQD
QDDKAVREYLDYAASLYDIEEEQALFILRRHGYDLPLAHRRLEKTETARG
CRYHRWKAEDLIRLTKAFEQYGTDFAKVRKELPHFPLAELRLYFSFMSSA
LETDDQQAIHRASFLDH
BO28332.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31875-PD | 161 | CG31875-PD | 1..161 | 1..161 | 856 | 100 | Plus |
CG31875-PC | 161 | CG31875-PC | 1..161 | 1..161 | 856 | 100 | Plus |
CG31875-PB | 161 | CG31875-PB | 1..161 | 1..161 | 856 | 100 | Plus |
CG31875-PA | 161 | CG31875-PA | 1..161 | 1..161 | 856 | 100 | Plus |