BO28343.complete Sequence
1654 bp assembled on 2011-07-18
GenBank Submission: KX797071
> BO28343.complete
GAAGTTATCAGTCGACATGCTGTGGGGAATCAGTTCCGCGCTTGATTTAT
ACGAGGAGTACCTAAGGGCCTTCAAGATCAAGGACGACCCGCTGCCGGAG
GATGAGCATGCACGCGAGGAAGCAGAAGAAGCGGCCGGAGATAATACTTT
GAACACCCTAAACATACTCATCTGCGGTGGAGCTGATCCACGGCATGTGA
TCAAGACGCTGGCCAAGAGATACACACATCGCATCCGACCCAAACTAAAT
ATCTATTTACTCGATGGTTGCGCCGAAATTGAAGCCAGGAACATGCTGCT
CCTGGGCGTAGCCCTGGAGGATCCCGAGTCCTTTAACCTGGTGTCCAAGG
TGCACTTGTTCATGGACCTCTACGGAAATGCGGTGATCCGTCCCAGCTCG
CACCATTACATGGCAGCCAAGGGACGCACACTGCTCAAAATGGTCACCAA
TGAGGAGGAACTTCAGCGCCTGGCTCCCATGCTGAATATAGAAGGACTAA
AGTACAAGGAACGAGATGGCTTTGAGATGGCTTTCACTTTTTGGCAGCCG
CAACCGTGGAATGTCTTTGAGGTGACCGCCTACTGGGAGCAAAGGTCGAG
GGCCCTGCTCGGCACCAGGTATGACCATCGCAACGGGGCCTTTGATTGGG
ACCTGAGCATGACCCTAAAGGAACGTGGAGGGCAGCAGATCTGTTCGCAG
GAGTACCGCTATTGGCGCGAGACCGGCGTGGCTTTCGTTTTTCCGGAATA
TGAGCATTGCAAGCCGAACAAGACACTGGCCGTTGGATTGGTGCGCAATG
GACGCAACTTCATCCACCGTGGCTATGTGGGTGATATCCAGACTGGACCG
TTTTGTGGCTTCGGGCTGCGCACCGTGGAGGAGCGAATGCATCATTCTGT
GCACGGTGATAATGATTATCGTGCTACCGATATAACAGAACGCAATCTCA
TGGAATTCTTCCATGAATTGCTGACCCAGACAGCCTACGAGCATGATACC
ACTCGTTCCCGACGGTATGGCTCTGTTCAGCTGCTGATGACGCCCTTGTT
GAACCACCAGGAAGAGGACGCTGCTGGGCAAGCGGCTTACGATAAGCCAT
GGATCCACGTGCCCGGAGTAACAGTGCACTTTGTGTCGCCCATGGAGATG
GAGCAGCTGAAAAAGGGTGCAGCTCATTGGAACAATATGTTTGATATCGT
CTTTATGGCCTATAACTATTACTCTTTCTTGAGCAAGGACTTCTTCCAGG
CGATGCGTGCGCAATCACTTTTTATTCTGGAAACCAAGCTGATGACGGTG
GAGCGCAAAGATCGTGTGCAGGAGTACGAATCCAAAGCTAAAGAACTGAT
GAAGGATGCTGGCCTTAAGGCGGCCATCAACTACCAGGCCATCAACGGCA
AGAACATGTGGCTAAAATACAAAAAGACCGATAAAGATGAACAAGAAGAT
GAAGCCGTGACAGAAGCCATGCCAGAAAGTACTTTCAAATATGACACAGA
CACAGATTATGGTGAACCTGCTGAAGAGTATACTGGTCTAGTAATTGAAG
AGATTCCCTCATCGAATCAGACTGTGGCAGCCATTAAGAAGGAAGTGGAG
GCAGAAGGTCCCCTACAACCAAAAACTAACTTCCCAGCAAGCTTTCTAGA
CCAT
BO28343.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:41:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17669-RA | 1623 | CG17669-PA | 1..1620 | 17..1636 | 8070 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17669-RA | 1726 | CG17669-RA | 64..1683 | 17..1636 | 8070 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18452780..18454399 | 1636..17 | 8070 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-26 21:41:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 8466..8661 | 1270..1469 | 152 | 57.1 | Plus |
BO28343.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 15:33:51 Download gff for
BO28343.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17669-RA | 64..1683 | 17..1638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:04 Download gff for
BO28343.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17669-RA | 64..1683 | 17..1638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:55 Download gff for
BO28343.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17669-RA | 64..1683 | 17..1638 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:55 Download gff for
BO28343.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18452777..18454399 | 17..1638 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:04 Download gff for
BO28343.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14340282..14341904 | 17..1638 | 99 | | Minus |
BO28343.pep Sequence
Translation from 16 to 1654
> BO28343.pep
MLWGISSALDLYEEYLRAFKIKDDPLPEDEHAREEAEEAAGDNTLNTLNI
LICGGADPRHVIKTLAKRYTHRIRPKLNIYLLDGCAEIEARNMLLLGVAL
EDPESFNLVSKVHLFMDLYGNAVIRPSSHHYMAAKGRTLLKMVTNEEELQ
RLAPMLNIEGLKYKERDGFEMAFTFWQPQPWNVFEVTAYWEQRSRALLGT
RYDHRNGAFDWDLSMTLKERGGQQICSQEYRYWRETGVAFVFPEYEHCKP
NKTLAVGLVRNGRNFIHRGYVGDIQTGPFCGFGLRTVEERMHHSVHGDND
YRATDITERNLMEFFHELLTQTAYEHDTTRSRRYGSVQLLMTPLLNHQEE
DAAGQAAYDKPWIHVPGVTVHFVSPMEMEQLKKGAAHWNNMFDIVFMAYN
YYSFLSKDFFQAMRAQSLFILETKLMTVERKDRVQEYESKAKELMKDAGL
KAAINYQAINGKNMWLKYKKTDKDEQEDEAVTEAMPESTFKYDTDTDYGE
PAEEYTGLVIEEIPSSNQTVAAIKKEVEAEGPLQPKTNFPASFLDH
BO28343.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:58:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17669-PA | 540 | CG17669-PA | 1..540 | 1..540 | 2874 | 100 | Plus |