BO28349.complete Sequence
595 bp assembled on 2011-06-27
GenBank Submission: KX799167
> BO28349.complete
GAAGTTATCAGTCGACATGTCCGCTTCAATTTGCTGCAGATGCAACGAGA
AGATTTGGCCACGGGCAGTTTGCAGCTTGGGTAAGACGTACCATCCGCAC
CACTTCACCTGCAAGGAGTGCGGCCTGGTGGTTGATCCTAAACTGTTTTT
CGCGGTGGACGACGACGTGGTCTGCAGCGAGTGCTATCTGGACAAGCATG
CCGCTCGGTGCTCCGCCTGCCGGACTCCGATCCTAGAGCGCGGCGTGGCT
GCTGCGGAGCGCAAGTGGCACGAAAAGTGTTTCCGGTGCGTGAGCTGCAG
CAAGTCGCTGGTCTCGGCGAGCTTCTTTGAAGTCAACGGATACCTGTTCT
GCAAGGCGCACTTCCGGGAACTGTTTTCGTCCCGCTGCGCAGGCTGTGAG
AAGCCAATCGATCGTCGAGCCGTGGTCGCGCTGAGCACCAAGTGGCATGC
CAAGTGCTTTAAGTGCCACCACTGCCGCAAAAGGATCAGCGCACGGGAAT
TCTGGATCGAGAACGGTCAACCCATTTGCGCAGCCTGCCAAACTGTAGTC
CCGAGTCCCCGAAATTTGTCAGCCCAAGCAAGCTTTCTAGACCAT
BO28349.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30178-RA | 564 | CG30178-PA | 1..561 | 17..577 | 2790 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30178-RA | 694 | CG30178-RA | 106..666 | 17..577 | 2790 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23986720..23987280 | 17..577 | 2790 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:52:52 has no hits.
BO28349.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:06 Download gff for
BO28349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30178-RA | 47..607 | 17..579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:47 Download gff for
BO28349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30178-RA | 106..666 | 17..579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:45 Download gff for
BO28349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30178-RA | 106..666 | 17..579 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:45 Download gff for
BO28349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23986720..23987280 | 17..579 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:47 Download gff for
BO28349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19874243..19874803 | 17..579 | 99 | | Plus |
BO28349.pep Sequence
Translation from 16 to 595
> BO28349.pep
MSASICCRCNEKIWPRAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDD
VVCSECYLDKHAARCSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVS
ASFFEVNGYLFCKAHFRELFSSRCAGCEKPIDRRAVVALSTKWHAKCFKC
HHCRKRISAREFWIENGQPICAACQTVVPSPRNLSAQASFLDH
BO28349.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30178-PA | 187 | CG30178-PA | 1..187 | 1..187 | 1053 | 100 | Plus |
| CG34325-PB | 179 | CG34325-PB | 6..177 | 4..174 | 442 | 43 | Plus |
| CG34325-PA | 179 | CG34325-PA | 6..177 | 4..174 | 442 | 43 | Plus |
| CG31624-PC | 178 | CG31624-PC | 6..176 | 5..174 | 420 | 39.8 | Plus |
| CG31624-PB | 178 | CG31624-PB | 6..176 | 5..174 | 420 | 39.8 | Plus |
| CG34325-PB | 179 | CG34325-PB | 64..176 | 3..114 | 181 | 31 | Plus |
| CG34325-PA | 179 | CG34325-PA | 64..176 | 3..114 | 181 | 31 | Plus |
