BO28350.complete Sequence
439 bp assembled on 2011-06-27
GenBank Submission: KX800023
> BO28350.complete
GAAGTTATCAGTCGACATGGAATTTGCCATACCAGAGGCTCAGTACTGGG
ACGTTTCGAAGAAATCCCAAAAAGATCGTCAGATGATTCGTAAATTCGTG
CCCGAGGCGGTCGACCTGGCCACCATAAGTCGTGCAGAGATCTACAGGAT
TGACACATTCTATTTGGAGTGCCAAAAGTACCGGGATCACTATCGTGACC
CCTACGGCAAGGTCCACTGTCCGGCATTCTTCCACCTGCACAAGGGCAAG
TGCGGAATCAAGCTGGACCAGAGCGTCATCAAGATGACGCAGGCGATTGC
CGCAACTGTGGACCGGCAGCCCATAGTTTTTCCCCTGATTCCGAACAAGA
GCATGTTTTTGGGTGGTAGCATTCCCATGGGGTCACAAACATCCCAAGTT
GGCGTCACTAGCTATCTCAGAGCAAGCTTTCTAGACCAT
BO28350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14391-RA | 408 | CG14391-PA | 1..405 | 17..421 | 2025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14391-RA | 614 | CG14391-RA | 95..500 | 16..421 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12694343..12694748 | 421..16 | 2030 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:53:06 has no hits.
BO28350.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:07 Download gff for
BO28350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14391-RA | 96..500 | 17..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:55 Download gff for
BO28350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14391-RA | 96..500 | 17..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:51 Download gff for
BO28350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14391-RA | 96..500 | 17..423 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:51 Download gff for
BO28350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12694340..12694747 | 17..423 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:55 Download gff for
BO28350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8520062..8520469 | 17..423 | 99 | | Minus |
BO28350.pep Sequence
Translation from 16 to 439
> BO28350.pep
MEFAIPEAQYWDVSKKSQKDRQMIRKFVPEAVDLATISRAEIYRIDTFYL
ECQKYRDHYRDPYGKVHCPAFFHLHKGKCGIKLDQSVIKMTQAIAATVDR
QPIVFPLIPNKSMFLGGSIPMGSQTSQVGVTSYLRASFLDH
BO28350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:45:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14391-PA | 135 | CG14391-PA | 1..135 | 1..135 | 713 | 100 | Plus |
CG31347-PA | 143 | CG31347-PA | 4..132 | 3..132 | 262 | 38.5 | Plus |
CG13110-PA | 133 | CG13110-PA | 3..112 | 5..116 | 229 | 42 | Plus |
CG43796-PA | 127 | CG43796-PA | 4..109 | 13..119 | 212 | 40.2 | Plus |