Clone BO28351 Report

Search the DGRC for BO28351

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:283
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG32110-RA
Protein status:BO28351.pep: Imported from assembly
Sequenced Size:1267

Clone Sequence Records

BO28351.complete Sequence

1267 bp assembled on 2011-06-27

GenBank Submission: KX795253

> BO28351.complete
GAAGTTATCAGTCGACATGCTGGCTTTCGAGAAGGAGATCGTGGAGAAAT
CTAGATATTTTGATCTAATCACAAAAGAGTGTCAGGATTACCCTATGGCC
AAGACAATGCCAGTTCTAAAGCAGCCCGAGAATTTCCAGGAACAAGAGGA
GGACGTTGTAATGGCCGTGCAAGAAAAACTCAAATTTTTCCGCAAACTAA
CCAGCAATGGTCCCGCAGTCCCGACACCGCTTAAAGTCGTTGAAAAGGAG
GACATAGGACATAAGGAGATACCAAAGGTGGTCAAGAAAGTTGACCGTAA
AACGAAACTGCTGCAAGCCATACCAGCGGTCTTCAAACATAGCCACAATC
GACGCTTTCGAAGATCCTTATTTTTAAGGTCCAACTATATCGAGCAATTT
CGGCGTTGGACGGATCAAAAAAACAAGTTAAATAGAAAGCGCTTGAATGA
AGCACATCAGTTGTGTTTAAAAGCCAAACACGAGCGAATTGCCTGCGAAA
TCGATAGATACAAGAAGCTGATCCTTAAGCAGTCCGTCCATGTGATCGAG
GACATAAGAATCAGCAGCGAATTGATTCCGCTGACCAAAGAACACCATGA
TCGGCTGATGGAACTATCTAAGTATCCACTGCAGCAGGTAATTGTGGCCA
AGTTCAATTTGGACATCTGCGGCAGTGATATCAAAATCCTGACCAGTGGC
GGCTGGCTCAACGACAAAATAATCAACTTTTACATGAACCTACTGGTCGA
GCGATCGGAGAAGCGTCCTGGTACAGTGCCCAGCGTGTATGCCATGAGCA
CTTTCTTTGTGCCCCGCCTGCTGCAAAGTGGCTTCGATGGCGTAAAACGC
TGGACTAGAAAGGTGGATCTGTTTAGCATGGACCTCATACTTGTGCCTGT
TCACCAAATGCTCGTTCACTGGTGCCTGGTCATAATCGATTTGCCTGCGA
AAACAATGCTCTACTACAATTCAAGAGGCCGCGGTGACCCGAATCTGATG
CGAGCACTAGTGAAGTACCTTCAAATGGAGTCGGAGGACAAGCTCGGGCT
GTGTTTGGACACCAGTGAATTTCGCATCGAGGATGCCCAAAATGTGCCGC
AACAAGACAACATGAACGATTGCGGCGTGTTCGTCTGCATGTTTGCAGAA
TACCTAACCCGGGATGCTCCAATAACGTTTTCCAAGAAAGACATGAAATA
TTTTCGCACTAAGATGGTTCTGGAGTTGACCGGCGACCAGCTGTGGAAGG
CAAGCTTTCTAGACCAT

BO28351.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32110-RA 1236 CG32110-PA 1..1233 17..1249 6165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32110-RA 1376 CG32110-RA 48..1281 16..1249 6170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12808768..12810001 16..1249 6170 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:53:20 has no hits.

BO28351.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:08 Download gff for BO28351.complete
Subject Subject Range Query Range Percent Splice Strand
CG32110-RA 49..1281 17..1251 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:00 Download gff for BO28351.complete
Subject Subject Range Query Range Percent Splice Strand
CG32110-RA 49..1281 17..1251 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:55 Download gff for BO28351.complete
Subject Subject Range Query Range Percent Splice Strand
CG32110-RA 49..1281 17..1251 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:55 Download gff for BO28351.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12808769..12810001 17..1251 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:00 Download gff for BO28351.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12801869..12803101 17..1251 99   Plus

BO28351.pep Sequence

Translation from 16 to 1267

> BO28351.pep
MLAFEKEIVEKSRYFDLITKECQDYPMAKTMPVLKQPENFQEQEEDVVMA
VQEKLKFFRKLTSNGPAVPTPLKVVEKEDIGHKEIPKVVKKVDRKTKLLQ
AIPAVFKHSHNRRFRRSLFLRSNYIEQFRRWTDQKNKLNRKRLNEAHQLC
LKAKHERIACEIDRYKKLILKQSVHVIEDIRISSELIPLTKEHHDRLMEL
SKYPLQQVIVAKFNLDICGSDIKILTSGGWLNDKIINFYMNLLVERSEKR
PGTVPSVYAMSTFFVPRLLQSGFDGVKRWTRKVDLFSMDLILVPVHQMLV
HWCLVIIDLPAKTMLYYNSRGRGDPNLMRALVKYLQMESEDKLGLCLDTS
EFRIEDAQNVPQQDNMNDCGVFVCMFAEYLTRDAPITFSKKDMKYFRTKM
VLELTGDQLWKASFLDH

BO28351.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG32110-PA 411 CG32110-PA 1..411 1..411 2145 100 Plus
Ulp1-PA 1513 CG12359-PA 1204..1513 111..411 717 47.1 Plus
CG11023-PC 480 CG11023-PC 164..480 109..409 664 45 Plus