BO28355.complete Sequence
1009 bp assembled on 2011-06-27
GenBank Submission: KX799718
> BO28355.complete
GAAGTTATCAGTCGACATGTCCGCTCCGGTCCGCGGACTGGACGAGAGCA
GCAAGGGCGTCATAGCCGCCAGCAAGCGCAGCCAGCAGAAATTGCGTCGA
CGCAAGATCTTCACGAGAACGCCCTCGTCCTCCGTACCGCTCGATGTCAT
CGGGGACAACTCTACGTCCTCGTCCTCCGTCGCCGGAAACGCATCCAAGA
AGGCTTTGAATCGGGCACGCAGCGTCGTTGCACCCGATGTGATTACCCTG
GTGTCCCTGTTGAGTTCCGAGGGCAGCGACTCCGAGCGGGAGGATAACAG
TTCAGTGGCGGTATCATCGCCGCCAACTGGCGGGTCGGATAAACAAACAT
CGGGCGCCTCGCAGCGAAGGGCGCCTTTGTTGAGGAAGACGGGCAAATCG
GTCTCGTTTCAAGACAGCTATCCGCCCACCTTCCAACTGGCCTCCAAGGA
GTACTCGCACATGATACGCCGCGGTTCGATAGCACCTCTGGCAGCCCGAA
TCCGAGCCAATCGACCGCCCACAGCGCCGCCAGTTTCCATTTTCCTAACC
GACGTCCAGGCCAAAATGGACCAGCAGCCGAAGAAGGAGGGTGGAGCTGA
CCCACCCGTTGTCACCTTATCGCCGGACGAGGCCAAGAAGGAGAACAATA
ACAACGCGGCCAATTGCGAGGACCAACAACCGCAGCCGGATCACAACTAT
CCGGCGTATGTGCGCAGTCTGAAGGAACGCGAGTGCTGGAAGTTGCACCA
GAAGATGGGAGCCAAGGGCGTCAGTGTGAGCTATGAAACGGTGTTGAGGG
GTATGCTCACGCCCACCGAGTTCCGGCACTTTCAAAAGCAGCGGGAGCAG
GAGGAGGCCCGAGTTCTCGAGGAGGCGGAGGCCGCCGAAGCGGCTGCTGC
AGCCGCAATCCTTGAGAGCGGCGAAAAGGATGGTCGCAAGCCTCCAGTCA
CGGCCATCGAACGCCTCTCGGAAGCTCTGCTCCAGAGCAAGGCAAGCTTT
CTAGACCAT
BO28355.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13203-RD | 978 | CG13203-PD | 1..975 | 17..991 | 4860 | 99.9 | Plus |
CG13203-RC | 1626 | CG13203-PC | 649..1623 | 17..991 | 4860 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13203-RD | 1617 | CG13203-RD | 352..1326 | 17..991 | 4860 | 99.9 | Plus |
CG13203-RC | 2286 | CG13203-RC | 1021..1995 | 17..991 | 4860 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11376228..11376818 | 401..991 | 2940 | 99.8 | Plus |
2R | 25286936 | 2R | 11375534..11375918 | 17..401 | 1925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:53:34 has no hits.
BO28355.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:09 Download gff for
BO28355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13203-RD | 352..1326 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:05 Download gff for
BO28355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13203-RC | 1021..1995 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:02 Download gff for
BO28355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13203-RC | 1021..1995 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:02 Download gff for
BO28355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11375534..11375918 | 17..401 | 100 | -> | Plus |
2R | 11376229..11376818 | 402..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:05 Download gff for
BO28355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7263039..7263423 | 17..401 | 100 | -> | Plus |
arm_2R | 7263734..7264323 | 402..993 | 99 | | Plus |
BO28355.pep Sequence
Translation from 16 to 1009
> BO28355.pep
MSAPVRGLDESSKGVIAASKRSQQKLRRRKIFTRTPSSSVPLDVIGDNST
SSSSVAGNASKKALNRARSVVAPDVITLVSLLSSEGSDSEREDNSSVAVS
SPPTGGSDKQTSGASQRRAPLLRKTGKSVSFQDSYPPTFQLASKEYSHMI
RRGSIAPLAARIRANRPPTAPPVSIFLTDVQAKMDQQPKKEGGADPPVVT
LSPDEAKKENNNNAANCEDQQPQPDHNYPAYVRSLKERECWKLHQKMGAK
GVSVSYETVLRGMLTPTEFRHFQKQREQEEARVLEEAEAAEAAAAAAILE
SGEKDGRKPPVTAIERLSEALLQSKASFLDH
BO28355.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:46:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13203-PD | 325 | CG13203-PD | 1..325 | 1..325 | 1627 | 100 | Plus |
CG13203-PC | 541 | CG13203-PC | 217..541 | 1..325 | 1627 | 100 | Plus |