BO28356.complete Sequence
271 bp assembled on 2011-06-27
GenBank Submission: KX798320
> BO28356.complete
GAAGTTATCAGTCGACATGAAAACAAGCAATCTCGGCCTGTACGCTTTCC
GTTTAACCTTCGGTCAGGCGCCGACGTTGTCCACACAGGCCACGACGCAC
TGCAGCCATGGCTTCACCACCAGCTCGTCGTCGCCCAACCGTGTGGTGAC
CCGCTCTGCCACCATGCTGGCGCTCTTCGGCATCGCGCTGTCCTCGTTCA
GCCTTAAGCAACTGCTGGCCAAGAAGCAGAAGCACCAGGGCCTGCGCAAG
CTCGCAAGCTTTCTAGACCAT
BO28356.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33199-RB | 240 | CG33199-PB | 1..237 | 17..253 | 1185 | 100 | Plus |
CG33199-RA | 240 | CG33199-PA | 1..237 | 17..253 | 1185 | 100 | Plus |
CG8229-RE | 882 | CG8229-PE | 741..882 | 66..207 | 710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33199-RB | 1523 | CG33199-RB | 211..448 | 16..253 | 1190 | 100 | Plus |
CG33199-RA | 1091 | CG33199-RA | 211..448 | 16..253 | 1190 | 100 | Plus |
CG8229-RE | 1951 | CG8229-RE | 1121..1308 | 66..253 | 940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8948756..8948944 | 253..65 | 945 | 100 | Minus |
2R | 25286936 | 2R | 8950705..8950757 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:53:46 has no hits.
BO28356.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:10 Download gff for
BO28356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33199-RA | 230..466 | 17..255 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:10 Download gff for
BO28356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33199-RA | 212..448 | 17..255 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:07 Download gff for
BO28356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33199-RA | 212..448 | 17..255 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:07 Download gff for
BO28356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8948754..8948941 | 68..255 | 98 | <- | Minus |
2R | 8950706..8950756 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:10 Download gff for
BO28356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4836259..4836446 | 68..255 | 98 | <- | Minus |
arm_2R | 4838211..4838261 | 17..67 | 100 | | Minus |
BO28356.pep Sequence
Translation from 16 to 271
> BO28356.pep
MKTSNLGLYAFRLTFGQAPTLSTQATTHCSHGFTTSSSSPNRVVTRSATM
LALFGIALSSFSLKQLLAKKQKHQGLRKLASFLDH
BO28356.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33199-PB | 79 | CG33199-PB | 1..79 | 1..79 | 393 | 100 | Plus |
CG33199-PA | 79 | CG33199-PA | 1..79 | 1..79 | 393 | 100 | Plus |