BO28357.complete Sequence
385 bp assembled on 2011-06-27
GenBank Submission: KX799710
> BO28357.complete
GAAGTTATCAGTCGACATGGAATACGGAAATGGTATGCAATACGATGGTT
ATAGCCAAGGTGGCGAGGGCTTTGAAATGCTGTACAACCAAACGAGCAGT
GGCCATGGATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAA
TTTTAATGGTGCATCTGCATCGCTTGGAGGTCCTGGCTATCGCAGTCCTT
TGCGATACACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTAC
TCTCCAATGGAACAGCAGCGGAGCAGTGGGCAAGGCGACTACTATAATAC
ATTGCCCGGCCTTGGCGGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCA
ATGGAAATCCATACTACGCAAGCTTTCTAGACCAT
BO28357.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:54:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15219-RA | 354 | CG15219-PA | 1..351 | 17..367 | 1725 | 99.4 | Plus |
CG15219-RC | 360 | CG15219-PC | 1..335 | 17..367 | 1450 | 94.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15219-RA | 521 | CG15219-RA | 111..462 | 16..367 | 1730 | 99.4 | Plus |
CG15219-RC | 505 | CG15219-RC | 111..446 | 16..367 | 1455 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22105116..22105299 | 249..66 | 890 | 98.9 | Minus |
2L | 23513712 | 2L | 22104950..22105067 | 367..250 | 590 | 100 | Minus |
2L | 23513712 | 2L | 22105350..22105402 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:54:05 has no hits.
BO28357.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:11 Download gff for
BO28357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15219-RA | 106..456 | 17..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:17 Download gff for
BO28357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15219-RA | 112..462 | 17..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:14 Download gff for
BO28357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15219-RA | 112..462 | 17..369 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:14 Download gff for
BO28357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22104948..22105067 | 250..369 | 98 | <- | Minus |
2L | 22105116..22105297 | 68..249 | 98 | <- | Minus |
2L | 22105351..22105401 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:17 Download gff for
BO28357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22104948..22105067 | 250..369 | 98 | <- | Minus |
arm_2L | 22105116..22105297 | 68..249 | 98 | <- | Minus |
arm_2L | 22105351..22105401 | 17..67 | 100 | | Minus |
BO28357.pep Sequence
Translation from 16 to 385
> BO28357.pep
MEYGNGMQYDGYSQGGEGFEMLYNQTSSGHGYSQQQSNCGQGSSNFNGAS
ASLGGPGYRSPLRYTKMLREMNSRNGLYSPMEQQRSSGQGDYYNTLPGLG
GPEGQAYQSRGNGNPYYASFLDH
BO28357.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15219-PA | 117 | CG15219-PA | 1..117 | 1..117 | 642 | 100 | Plus |
CG15219-PC | 119 | CG15219-PC | 1..79 | 1..79 | 428 | 100 | Plus |