BO28361.complete Sequence
901 bp assembled on 2011-06-28
GenBank Submission: KX796465
> BO28361.complete
GAAGTTATCAGTCGACATGTTCGAATGCATAAGTTTCTTGTTCCTGGCTG
CCTTGGCCTTCGTGGCCTGGGCCGTTCTCTGCTTCCAGCACTTCGTCCAG
GTCCAGACGCGGCTCTCCTCTGATTTCCGAGTCGAATTATACACAGAGCG
TCCTGGGATTACGTTTGAGCCGCAGCTGTGCCACAGTCCCTCAGAGCAGA
GTAGCTCCGACAGCTCCGACAGCACCTACCAGTTTGCGACGAGCTTCGGC
GTGATCTTTGCCCTGACCTTTGGTCTGTCCAAGCTGCTCCAACTGGCGGA
GCTGCAGGCCAAAAGGTATTTCAAGAGCAAAAAGGCGCTGCATCCCAAAT
CTGCTGCCAAAGTGCAGGACCCAGTTGTTGAGCAGAAGGCGCCAAGCCAG
CAGGACGATTCGAATCCCTTCGATCTCCTGCAGGACCACAATGAAAATCT
GAAGGAGCAGCTCAGTATCCTGCAGTTGCAGTGTCTGGAAATGCGCGAAC
TTCTGCACGAGCTGGATATCAGCAGTAGCTCCAGTAGCTATGGAAGTGTC
AGATCCGGAAACCGGGTAGCAATGGCCAAGTCCTCCGAAGAATCAATGGT
GGTGTGGAGGCGATCGGACTCCCTGACCGGTACGGTCTCCGGCTCATTGC
ACGCCGAAAAGGTCAACTCCCCCTCCACACAAAACATCTACATTACCAAC
AGCCACTTCCACATCAACGGACAGGTCTACCTGACCGAGAACCACGTGAA
CGTCGAGCTCACCCAGAACGCTTCTTTGTTCGGTCGGGGGCAGAGCGAGT
TCCTGCAGGTGGCGGGAAGGTTCATCTCCGGACCAAAGAAGATGCCCATG
TTAACGGGCATGCGGTGCCACAACATCCTCATAGCAAGCTTTCTAGACCA
T
BO28361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7202-RA | 870 | CG7202-PA | 1..867 | 17..883 | 4335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7202-RA | 986 | CG7202-RA | 67..934 | 16..883 | 4340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21491451..21492191 | 883..143 | 3705 | 100 | Minus |
| 3L | 28110227 | 3L | 21492577..21492707 | 146..16 | 655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:03:26 has no hits.
BO28361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:15:59 Download gff for
BO28361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7202-RA | 73..934 | 22..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:51:18 Download gff for
BO28361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7202-RA | 73..934 | 22..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:14 Download gff for
BO28361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7202-RA | 73..934 | 22..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:14 Download gff for
BO28361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21491448..21492187 | 147..885 | 99 | <- | Minus |
| 3L | 21492577..21492701 | 22..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:51:18 Download gff for
BO28361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21484548..21485287 | 147..885 | 99 | <- | Minus |
| arm_3L | 21485677..21485801 | 22..146 | 100 | | Minus |
BO28361.pep Sequence
Translation from 16 to 901
> BO28361.pep
MFECISFLFLAALAFVAWAVLCFQHFVQVQTRLSSDFRVELYTERPGITF
EPQLCHSPSEQSSSDSSDSTYQFATSFGVIFALTFGLSKLLQLAELQAKR
YFKSKKALHPKSAAKVQDPVVEQKAPSQQDDSNPFDLLQDHNENLKEQLS
ILQLQCLEMRELLHELDISSSSSSYGSVRSGNRVAMAKSSEESMVVWRRS
DSLTGTVSGSLHAEKVNSPSTQNIYITNSHFHINGQVYLTENHVNVELTQ
NASLFGRGQSEFLQVAGRFISGPKKMPMLTGMRCHNILIASFLDH
BO28361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:48:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7202-PA | 289 | CG7202-PA | 1..289 | 1..289 | 1473 | 100 | Plus |
