BO28374.complete Sequence
1210 bp assembled on 2011-06-27
GenBank Submission: KX796341
> BO28374.complete
GAAGTTATCAGTCGACATGTCCGCACTACGGCGATCACATGGCGGAGGTC
GTGATTTTCTGCAGGAGAACAAGCAAAATGTGTCTAGAATGGAGACCAAT
GGCAGATGTATAGCGGCGGCCAATGCCCGTCGTGTTCCCCTGTGGCGTCC
AGTGGTCCTCCACTATCCGGAGAAGTTGCGTCCCCATGTCTACAATATTC
AGCGTCGTACACGCCCGCTGCACGGAGCCCATGAGTCTCCTCGCCTGCGA
AGCGGTCTTGCCCAGCCGTATGGCTTTCACAACGAGATGCGCCGCAGGAT
GCCACCAAATCCCTGTGGTTGCGATTTGACCACACGTAAAACGGTGGAAC
GTAAGGAGCAGGAGCGCCTACAGGGCGGTTGGGAGGATCAGCAAGTGCCA
AGGAAATGCTGCTCCGGTTGCACCTGCCATCACGGCTATCCGACTAATAA
GCCATCTGATCAGGATCACCAGGCAAAGGAGGTGTCACAGCATCAGGGTC
ACCACGGCCAAGCAGTTGCTCCACATCAGGGTCAACAATCGGAAACGGAT
GGCCAAATCCAACCAAAACATGGCGAAGGTGATCAGGCCGATCGCATTTC
GGTATGCTCCCGCATGTCCCAAGAATCCCGGGCATCTCGGGCATCTCGGG
CATCTCGGGCGTCTCGGGCGTCTCGTCGCTCCGAGGCACAGTCAACACAG
GGCCAGGGAAACAACGATCCCGAGGCACCCTTGAGCGCTCGCAGCAGTGC
CTCCACAAAGACCCTCAAGTCCAAGCGATCCGTTTCCCAGGAGAGTGTGC
GCTCGAATGCCACCATCAAGTCGAACATTACTGTGGCCTCCAGAAGCACC
ACGGCTTCGAAGAGATCTCAAGTCAGTCGCAAGTCGAAGTTAATGGAGGT
AATGCCGCCACCAACCCACTTGGAGGATCGTAGGCCCAAGGAGCGAGAGA
AGGAGAAGGCGCCAACTGCCATCGAAGGCTACACACCGTTGACGCCCAGC
GAGAGACAGGCTGCTCTCCAGGATGCCCACGTTAAATATAGTAAGCTGGT
CGAGGAATACAATCGTATGCCCGTTTCTGAGCCAACTTTGCGCGTGCGCA
ATCGAAAAATCGCAATCGAACGCCAACTGGACGAACTGGACTATGCCATC
AATATGTTTGATCAGCCCCATATGGATATGTATTATAAGAAGGCAAGCTT
TCTAGACCAT
BO28374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:55:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32591-RB | 1179 | CG32591-PB | 1..1176 | 17..1192 | 5880 | 100 | Plus |
| CG32591-RA | 1179 | CG32591-PA | 1..1176 | 17..1192 | 5880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32591-RB | 1743 | CG32591-RB | 170..1345 | 17..1192 | 5880 | 100 | Plus |
| CG32591-RA | 1499 | CG32591-RA | 170..1345 | 17..1192 | 5880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14927600..14928775 | 1192..17 | 5880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:55:28 has no hits.
BO28374.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:14 Download gff for
BO28374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32591-RA | 170..1345 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:50 Download gff for
BO28374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32591-RA | 170..1345 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:49 Download gff for
BO28374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32591-RA | 170..1345 | 17..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:49 Download gff for
BO28374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14927597..14928775 | 17..1194 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:50 Download gff for
BO28374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14821630..14822808 | 17..1194 | 99 | | Minus |
BO28374.pep Sequence
Translation from 16 to 1210
> BO28374.pep
MSALRRSHGGGRDFLQENKQNVSRMETNGRCIAAANARRVPLWRPVVLHY
PEKLRPHVYNIQRRTRPLHGAHESPRLRSGLAQPYGFHNEMRRRMPPNPC
GCDLTTRKTVERKEQERLQGGWEDQQVPRKCCSGCTCHHGYPTNKPSDQD
HQAKEVSQHQGHHGQAVAPHQGQQSETDGQIQPKHGEGDQADRISVCSRM
SQESRASRASRASRASRASRRSEAQSTQGQGNNDPEAPLSARSSASTKTL
KSKRSVSQESVRSNATIKSNITVASRSTTASKRSQVSRKSKLMEVMPPPT
HLEDRRPKEREKEKAPTAIEGYTPLTPSERQAALQDAHVKYSKLVEEYNR
MPVSEPTLRVRNRKIAIERQLDELDYAINMFDQPHMDMYYKKASFLDH
BO28374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:47:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32591-PB | 392 | CG32591-PB | 1..392 | 1..392 | 2065 | 100 | Plus |
| CG32591-PA | 392 | CG32591-PA | 1..392 | 1..392 | 2065 | 100 | Plus |
| CG11125-PC | 388 | CG11125-PC | 25..375 | 12..383 | 174 | 23.8 | Plus |
| CG11125-PA | 388 | CG11125-PA | 25..375 | 12..383 | 174 | 23.8 | Plus |
