BO28382.complete Sequence
1345 bp assembled on 2011-06-28
GenBank Submission: KX796269
> BO28382.complete
GAAGTTATCAGTCGACATGGATAATGAAAGGATGTCCGCCGTGAGCGAGC
ACTCAAGTGTGGTATGCTCTCCCGAACAGATGGCCCAGAAGATCAAAGCC
GGTCCCGTTGTGGATGTCCTCGGTGACGAGATGACCCGCATCATTTGGGA
CTCCATTAAGAGCCAACTGATTCTGCCCTTCCTGGACATTGAGCTGCATA
CCTACGATCTGGGTATTGAGAACCGCGATAAAACCGAGGACCAGGTCACC
ATTGACTGTGCTGAGGCCATCAAGAAGTACAACGTGGGCATCAAGTGCGC
CACAATCACTCCCGACGAGAAGCGCGTAGAGGAGTTCAACCTGAAGAAGA
TGTGGAAGTCGCCCAACGGTACCATCCGTAACATCTTGGGAGGAACCGTC
TTCCGTGAGGCAATCATCTGCAAGAACGTGCCCCGTCTGGTGACTGGCTG
GCAGAAGCCTATTGTGATCGGTCGCCATGCCCACGCCGATCAGTACAAGG
CCGTCGACTACGTGGTTCCCGGACCCGGCAAGCTGACCCTCACCTGGAAG
GGAACCGACGGTCAGGTCATCGATGAGGTCATTAATGACTTCAAGGGCCC
CGGTATTGCCCTGGGAATGTTCAACACGGACGATTCCATTGTGGACTTTG
CCCACGCCTCTTTCAAATATGCTCTGGACCGCAAGCTGCCGCTGTACATG
AGCACCAAGAACACCATTCTGAAGAAGTACGATGGACGCTTCAAGGACAT
ATTCGAGGACCTGTACAACAAGCAGTACAAGAAGGAGTACGAGGCGGCGG
GCATCTGGTATGAGCACCGTCTCATCGACGATATGGTTGCTTATGCCATG
AAGTCGGAGGGTGGCTTCGTGTGGGCCTGCAAGAACTACGACGGTGATGT
GCAGTCGGACTCCGTTGCCCAGGGATACGGATCTCTGGGTCTGATGACCT
CCGTGCTGCTATGCCCCGATGGCAAGACCGTGGAGGCTGAAGCCGCTCAC
GGAACGGTGACGCGTCACTTCCGCTTCTACCAGCAGGGCAAGGAGACCTC
CACCAACCCCATTGCCTCGATATTCGCCTGGACCCGTGGCCTGCTGCATC
GTGCCAAGCTGGACAACAATGAGCCACTGAAGCAGTTCGCCGACACCCTT
GAGCAGGTGTGCATCGACACAATTGAGAGCGGCGCCATGACCAAGGATCT
GGCCATCTGCATTAAAGGCAACATCAACGCCGTTACTCGCAGGGACTACC
AGGAGACTTTTGAGTTCATTAACACGCTGGCCAAGAACCTGGAGGGTGCC
CTGGCCAAGAATGCCGTTGCTGCCAAAGCAAGCTTTCTAGACCAT
BO28382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idh-RK | 1440 | CG7176-PK | 126..1437 | 16..1327 | 6500 | 99.7 | Plus |
| Idh-RD | 1314 | CG7176-PD | 1..1311 | 17..1327 | 6495 | 99.7 | Plus |
| Idh-RC | 1410 | CG7176-PC | 158..1407 | 78..1327 | 6190 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idh-RK | 1974 | CG7176-RK | 409..1720 | 16..1327 | 6500 | 99.7 | Plus |
| Idh-RD | 1642 | CG7176-RD | 77..1388 | 16..1327 | 6500 | 99.7 | Plus |
| Idh-RF | 1646 | CG7176-RF | 113..1392 | 48..1327 | 6340 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8356658..8357937 | 1327..48 | 6340 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:24:20 has no hits.
BO28382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:55:49 Download gff for
BO28382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 78..1388 | 17..1329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:00:08 Download gff for
BO28382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 78..1388 | 17..1329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:18 Download gff for
BO28382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 78..1388 | 17..1329 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:18 Download gff for
BO28382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8356654..8357935 | 50..1329 | 99 | <- | Minus |
| 3L | 8358016..8358048 | 17..49 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:00:08 Download gff for
BO28382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8349754..8351035 | 50..1329 | 99 | <- | Minus |
| arm_3L | 8351116..8351148 | 17..49 | 100 | | Minus |
BO28382.pep Sequence
Translation from 16 to 1345
> BO28382.pep
MDNERMSAVSEHSSVVCSPEQMAQKIKAGPVVDVLGDEMTRIIWDSIKSQ
LILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIKKYNVGIKCATITPD
EKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIV
IGRHAHADQYKAVDYVVPGPGKLTLTWKGTDGQVIDEVINDFKGPGIALG
MFNTDDSIVDFAHASFKYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLY
NKQYKKEYEAAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSV
AQGYGSLGLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIA
SIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCIDTIESGAMTKDLAICIK
GNINAVTRRDYQETFEFINTLAKNLEGALAKNAVAAKASFLDH
BO28382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:52:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idh-PK | 479 | CG7176-PK | 43..479 | 1..437 | 2298 | 100 | Plus |
| Idh-PD | 437 | CG7176-PD | 1..437 | 1..437 | 2298 | 100 | Plus |
| Idh-PC | 469 | CG7176-PC | 43..469 | 1..437 | 2223 | 97.7 | Plus |
| Idh-PJ | 450 | CG7176-PJ | 35..450 | 22..437 | 2191 | 100 | Plus |
| Idh-PI | 450 | CG7176-PI | 35..450 | 22..437 | 2191 | 100 | Plus |
