BO28513.complete Sequence
445 bp assembled on 2011-07-13
GenBank Submission: KX797407
> BO28513.complete
GAAGTTATCAGTCGACATGCGATTCCTAATTGTCGTTGCTCTTGTGGCCT
TTTTGGCTGTTGGTCTTGTGGCTGCACGGCCAGCTGAGGATGAGGAGTCC
TCCATCCAGGATAACACCAATGAGGATTCGTCCAGTAATGATGGCGAGGG
AAACTCCGATGCTGCCGAGGAAGAACCTGCTGTTGAAGAAAGTCAAGATT
CTGGAAATGTGGATAACCAGGATGATGAAAATAGCGAGGATAATCAGGAG
GAGTCAGATAATGAATCAAGCGGAGATGATGAGGAAGATAACAACGGGTC
TGATGATAATACCGAATCGGATAATAATAACGATTCAGAAGGCGATCAGG
AGCAGGATGCTCCACCCAACAACCAGATTCGACCATTCGGACCTCTTCTC
ATCCAAGCAAGGCCCCTTTTCCTCGATGCAAGCTTTCTAGACCAT
BO28513.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:49:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13461-RA | 414 | CG13461-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
| CG12310-RA | 345 | CG12310-PA | 1..87 | 17..103 | 255 | 86.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13461-RA | 560 | CG13461-RA | 16..426 | 17..427 | 2055 | 100 | Plus |
| CG12310-RA | 544 | CG12310-RA | 42..128 | 17..103 | 255 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15052065..15052475 | 427..17 | 2055 | 100 | Minus |
| 3L | 28110227 | 3L | 15050679..15050765 | 103..17 | 255 | 86.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:49:03 has no hits.
BO28513.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:08 Download gff for
BO28513.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13461-RA | 16..426 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:10:29 Download gff for
BO28513.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13461-RA | 16..426 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:08 Download gff for
BO28513.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13461-RA | 16..426 | 17..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:08 Download gff for
BO28513.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15052063..15052475 | 17..429 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:10:29 Download gff for
BO28513.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15045163..15045575 | 17..429 | 99 | | Minus |
BO28513.pep Sequence
Translation from 16 to 445
> BO28513.pep
MRFLIVVALVAFLAVGLVAARPAEDEESSIQDNTNEDSSSNDGEGNSDAA
EEEPAVEESQDSGNVDNQDDENSEDNQEESDNESSGDDEEDNNGSDDNTE
SDNNNDSEGDQEQDAPPNNQIRPFGPLLIQARPLFLDASFLDH
BO28513.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:55:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13461-PA | 137 | CG13461-PA | 1..137 | 1..137 | 704 | 100 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 812..901 | 25..114 | 193 | 33.3 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 812..901 | 25..114 | 193 | 33.3 | Plus |
| CG12310-PA | 114 | CG12310-PA | 1..111 | 1..133 | 186 | 40.8 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 788..890 | 24..114 | 180 | 34 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 788..890 | 24..114 | 180 | 34 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 759..861 | 24..114 | 167 | 32 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 759..861 | 24..114 | 167 | 32 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 745..831 | 24..114 | 164 | 31.9 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 745..831 | 24..114 | 164 | 31.9 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 765..869 | 24..119 | 163 | 32.4 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 765..869 | 24..119 | 163 | 32.4 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 836..928 | 25..114 | 159 | 33 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 836..928 | 25..114 | 159 | 33 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 870..977 | 25..122 | 158 | 31.5 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 870..977 | 25..122 | 158 | 31.5 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 729..822 | 30..120 | 156 | 26.6 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 729..822 | 30..120 | 156 | 26.6 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 740..829 | 25..114 | 155 | 29.7 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 740..829 | 25..114 | 155 | 29.7 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 840..938 | 24..120 | 148 | 25.3 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 840..938 | 24..120 | 148 | 25.3 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 848..948 | 24..119 | 147 | 26.7 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 848..948 | 24..119 | 147 | 26.7 | Plus |
| CG12017-PB | 522 | CG12017-PB | 164..272 | 24..133 | 145 | 28.2 | Plus |
